Comparing 349879 FitnessBrowser__Btheta:349879 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
7cyyC Crystal structure of arabinose isomerase from hybrid ai8 with adonitol
51% identity, 97% coverage: 8:502/509 of query aligns to 8:494/497 of 7cyyC
Q9S467 L-arabinose isomerase; EC 5.3.1.4 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see paper)
51% identity, 97% coverage: 8:502/509 of query aligns to 7:493/496 of Q9S467
4r1qE Crystal structure of thermophilic geobacillus kaustophilus l-arabinose isomerase in complex with l-arabitol
51% identity, 97% coverage: 8:502/509 of query aligns to 7:493/496 of 4r1qE
7ch3B Crystal structure of arabinose isomerase from hyper thermophilic bacterium thermotoga maritima (tmai) triple mutant (k264a, e265a, k266a)
50% identity, 99% coverage: 5:506/509 of query aligns to 4:495/495 of 7ch3B
7chlA Crystal structure of hybrid arabinose isomerase ai-10
50% identity, 97% coverage: 8:502/509 of query aligns to 6:495/498 of 7chlA
7ch3A Crystal structure of arabinose isomerase from hyper thermophilic bacterium thermotoga maritima (tmai) triple mutant (k264a, e265a, k266a)
49% identity, 99% coverage: 5:506/509 of query aligns to 4:469/469 of 7ch3A
4f2dA Crystal structure of escherichia coli l-arabinose isomerase (ecai) complexed with ribitol
47% identity, 98% coverage: 3:502/509 of query aligns to 2:496/498 of 4f2dA
>349879 FitnessBrowser__Btheta:349879
MNNVFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKE
VEAVFKAANNDDKCVGVITWMHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMD
FMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKEEETLHKIAVWMRVCAGWADSQDMLII
RFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMEYHKDIKNADVDALVATYFNDYDH
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLAS
QRLMAEGYGFGAEGDWKSAALYRTVWVMNQGLPKGCSFLEDYTLNFDGANSSILQSHMLE
ICPLIAANKPRLEVHFLGIGIRKSQTARLVFTSKTGTGCTATVVDMGNRFRLIVNDVECI
EPKPLPKLPVASALWIPMPNLEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMV
HINKDTTISCFKKELRMNEVYYMLNKALC
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory