SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 350818 FitnessBrowser__Btheta:350818 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

B5Z7I3 Ergothioneine transport permease/ergothioneine binding protein EgtU from Helicobacter pylori (strain G27) (see paper)
35% identity, 36% coverage: 96:187/258 of query aligns to 91:182/553 of B5Z7I3

query
sites
B5Z7I3
F
 
F
I
 
L
L
 
L
P
 
P
M
 
V
W
 
-
V
 
V
N
 
N
I
 
F
L
 
L
V
 
Y
R
 
-
T
 
T
L
 
I
A
 
P
T
 
S
V
 
L
A
 
A
L
 
L
F
 
F
D
 
A
F
 
L
F
 
F
S
 
I
V
 
P
P
 
V
L
 
I
G
 
G
E
 
V
G
 
G
-
 
L
-
 
K
-
 
N
A
 
A
L
 
L
I
 
L
F
 
V
G
 
L
M
 
V
V
 
L
Y
 
Y
N
 
G
F
 
L
I
 
L
P
 
P
F
 
-
M
 
I
I
 
V
Y
 
Y
P
 
S
I
 
T
Y
 
Y
N
 
N
T
 
A
L
 
L
Q
 
K
K
 
E
M
 
V
D
 
R
H
 
E
S
 
E
Y
 
V
I
 
I
E
 
K
A
 
A
A
 
A
Q
 
I
D
 
G
L
 
L
G
 
G
A
 
C
N
 
N
P
 
P
V
 
K
Q
 
E
V
 
L
F
 
F
F
 
F
K
 
R
A
 
V
V
 
H
L
 
F
P
 
L
L
 
L
S
 
A
M
 
I
P
 
P
G
 
Q
V
 
I
M
 
L
S
 
A
G
 
G
I
 
L
M
 
R
M
 
I

Sites not aligning to the query:

Query Sequence

>350818 FitnessBrowser__Btheta:350818
MSSRKSWTLPYIIFSAIFVVIPLVLIVVYAFTDDNGHLTLANFQKFFEHPEAINTFVYSI
GIAIITTLICILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSV
PLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVLPLSMPG
VMSGIMMVFMPTISTFAIAELLTMNNIKLFGTTIQENINNSMWNYGAALSLIMLLLIAAT
SLFSTDDKDNTNEGGGLW

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory