Comparing 351445 BT1917 propionyl-CoA carboxylase beta chain (NCBI ptt file) to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1vrgA Crystal structure of propionyl-coa carboxylase, beta subunit (tm0716) from thermotoga maritima at 2.30 a resolution
58% identity, 97% coverage: 14:511/511 of query aligns to 4:515/515 of 1vrgA
8pn7A Engineered glycolyl-coa carboxylase (g20r variant) with bound coa (see paper)
57% identity, 98% coverage: 11:511/511 of query aligns to 4:506/506 of 8pn7A
Q168G2 Propionyl-CoA carboxylase beta chain; EC 6.4.1.3 from Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) (see paper)
56% identity, 98% coverage: 11:511/511 of query aligns to 8:510/510 of Q168G2
3n6rB Crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) (see paper)
56% identity, 98% coverage: 11:511/511 of query aligns to 4:506/506 of 3n6rB
7ybuP Human propionyl-coenzyme a carboxylase
58% identity, 98% coverage: 12:511/511 of query aligns to 8:507/507 of 7ybuP
3ib9A Propionyl-coa carboxylase beta subunit, d422l (see paper)
56% identity, 97% coverage: 14:511/511 of query aligns to 13:521/521 of 3ib9A
1xnyA Biotin and propionyl-coa bound to acyl-coa carboxylase beta subunit from s. Coelicolor (pccb) (see paper)
56% identity, 97% coverage: 14:511/511 of query aligns to 13:521/521 of 1xnyA
8sgxE Leishmania tarentolae propionyl-coa carboxylase (alpha-4-beta-6) (see paper)
55% identity, 94% coverage: 30:511/511 of query aligns to 8:489/489 of 8sgxE
1on3C Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
52% identity, 97% coverage: 13:510/511 of query aligns to 14:509/510 of 1on3C
1on3E Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
52% identity, 97% coverage: 13:510/511 of query aligns to 18:519/520 of 1on3E
5iniF Structural basis for acyl-coa carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics (see paper)
50% identity, 97% coverage: 15:511/511 of query aligns to 4:511/511 of 5iniF
4g2rB Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor haloxyfop from mycobacterium tuberculosis (see paper)
39% identity, 81% coverage: 76:491/511 of query aligns to 28:433/441 of 4g2rB
6tzvA Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor phenyl-cyclodiaone from mycobacterium tuberculosis
37% identity, 81% coverage: 76:491/511 of query aligns to 29:418/426 of 6tzvA
6prwA Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p derivative from mycobacterium tuberculosis
37% identity, 81% coverage: 76:491/511 of query aligns to 29:418/426 of 6prwA
6pk2A Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p derivative from mycobacterium tuberculosis
37% identity, 81% coverage: 76:491/511 of query aligns to 29:418/426 of 6pk2A
6p7uA Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p from mycobacterium tuberculosis
37% identity, 81% coverage: 76:491/511 of query aligns to 29:418/426 of 6p7uA
6tzvC Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor phenyl-cyclodiaone from mycobacterium tuberculosis
37% identity, 81% coverage: 76:491/511 of query aligns to 29:402/410 of 6tzvC
6prwC Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p derivative from mycobacterium tuberculosis
37% identity, 81% coverage: 76:491/511 of query aligns to 29:402/410 of 6prwC
6pk2C Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p derivative from mycobacterium tuberculosis
37% identity, 81% coverage: 76:491/511 of query aligns to 29:402/410 of 6pk2C
6p7uC Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p from mycobacterium tuberculosis
37% identity, 81% coverage: 76:491/511 of query aligns to 29:402/410 of 6p7uC
>351445 BT1917 propionyl-CoA carboxylase beta chain (NCBI ptt file)
MEEINKAYAMFQERDRIASLGGGVEKIEKQHESGKMTARERIEMLLDKGTFVELDKLMVH
RCTNYGMDKNKIPGDGIVSGYGKIDGRQVFVYAYDFTVYGGSLSASNAKKIVKVQQLALK
NGAPIIALNDSGGARIQEGIESLSGYADIFYQNTMASGVIPQISAILGPCAGGACYSPAL
TDFIFMVKEKSHMFVTGPDVVKTVIHEEVSKEELGGAMTHSSKSGVTHFMCNTEEELLMS
IRELLSFLPQNNMDETKKQNCTDETNREDAVLDTIVPADPNVPYDMKDIIERVVDNGYFF
EVMTNFAKNIIIGFARLAGRSVGIVANQPAYLAGVLDIDASDKASRFIRFCDCFNIPLIT
FEDVPGFLPGYTQENNGIIRHGAKIVYAFAEATVPKLTVITRKAYGGAYIVMNSKQTGAD
VNFAYPSAEIAVMGAEGAVNILFRKADAETKGKELEAYKEKFATPYQAAELGFIDEIIYP
RQTRKRLIQALEMTENKMQTNPPKKHGNMPL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory