Comparing 352283 FitnessBrowser__Btheta:352283 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
P0ABN9 Anaerobic C4-dicarboxylate transporter DcuB from Escherichia coli (strain K12) (see paper)
41% identity, 92% coverage: 36:436/436 of query aligns to 38:443/446 of P0ABN9
>352283 FitnessBrowser__Btheta:352283
MILQLAFVLTAIIIGARLGGIGLGVMGGVGLGILTFVFGLQPTAPPIDVMLMIAAVISAA
SCMQAAGGLDYMVKLAEHLLRKNPSHVTLLSPLVTYLFTFIAGTGHVAYSVLPVIAEVAT
ETKIRPERPLGIAVIASQQAITASPISAATVALLGLLAGFDITLFDILKITIPATIIGVL
VGALFSMKVGKELIEDPEYQKRLKEGLFNDKKIEIKDVKNKRSAMLSVLIFILATAFIVL
FGSFEGMRPSFLIDGEIVTLGMSSIIEIVMLSAAAIILIVTKTDGIKATQGSVFPAGMQA
VIAIFGIAWMGDTFLQGNMAQLTLSIEGIVRQMPWLFGIALFVMSILLYSQAATVRALMP
LGIALGISPYMLIALFPAVNGYFFIPNYPTVVAAINFDRTGTTKIGKYVLNHSFMMPGLV
STVVAIVLGLLFIQIF
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory