Comparing 353218 FitnessBrowser__Btheta:353218 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 9 hits to proteins with known functional sites (download)
6ioxA Crystal structure of porphyromonas gingivalis phosphotransacetylase in complex with acetyl-coa (see paper)
64% identity, 99% coverage: 3:336/339 of query aligns to 6:338/339 of 6ioxA
P38503 Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Methanosarcina thermophila (see 2 papers)
46% identity, 99% coverage: 1:334/339 of query aligns to 1:330/333 of P38503
2af3C Phosphotransacetylase from methanosarcina thermophila soaked with coenzyme a (see paper)
46% identity, 98% coverage: 2:334/339 of query aligns to 1:329/332 of 2af3C
1xcoD Crystal structure of a phosphotransacetylase from bacillus subtilis in complex with acetylphosphate (see paper)
45% identity, 98% coverage: 1:333/339 of query aligns to 3:325/325 of 1xcoD
Q8ZND6 Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.222; EC 2.3.1.8 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
47% identity, 96% coverage: 7:332/339 of query aligns to 394:709/714 of Q8ZND6
Sites not aligning to the query:
6zngF Maeb full-length acetyl-coa bound state (see paper)
34% identity, 98% coverage: 2:332/339 of query aligns to 423:743/753 of 6zngF
Sites not aligning to the query:
P76558 NADP-dependent malic enzyme; NADP-ME; EC 1.1.1.40 from Escherichia coli (strain K12) (see paper)
33% identity, 97% coverage: 4:332/339 of query aligns to 430:754/759 of P76558
Sites not aligning to the query:
3u9eB The crystal structure of a possible phosphate acetyl/butaryl transferase (from listeria monocytogenes egd-e) in complex with coa.
31% identity, 47% coverage: 162:320/339 of query aligns to 123:274/288 of 3u9eB
Sites not aligning to the query:
3uf6A The crystal structure of a possible phosphate acetyl/butaryl transferase (from listeria monocytogenes egd-e) in complex with cod (3'-dephosphocoenzyme a)
31% identity, 47% coverage: 162:320/339 of query aligns to 121:272/285 of 3uf6A
Sites not aligning to the query:
>353218 FitnessBrowser__Btheta:353218
MLNLINQIVARAKADRQRIVLPEGTEERTLKAANQILTDEVADLILLGKPAEINELAVKW
GLGNISKATIIDPETSPKHEEYAQLLCELRKKKGMTIEEARQLTNDPLFYGCLMIKSGDA
DGQLAGARNTTGNVLRPALQIIKTAPGITCVSGAMLLLTHAPEYGKNGILVMGDVAVTPV
PDPNQLAQIAVCTAQTAKAVAGIENPKVAMLSFSTKGSAKHEVVDKVVEATKIAKEMAPT
LDLDGEMQADAALVPEVGASKAPGSPVAGEANVLIVPSLEVGNISYKLVQRLGHADAIGP
ILQGIARPVNDLSRGCSIEDVYRMIAITANQAIAAKNNK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory