Comparing 353925 FitnessBrowser__Btheta:353925 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
P52697 6-phosphogluconolactonase; 6-P-gluconolactonase; Pgl; EC 3.1.1.31 from Escherichia coli (strain K12) (see paper)
30% identity, 84% coverage: 45:364/383 of query aligns to 9:311/331 of P52697
5c2vB Kuenenia stuttgartiensis hydrazine synthase (see paper)
31% identity, 35% coverage: 234:368/383 of query aligns to 14:135/352 of 5c2vB
>353925 FitnessBrowser__Btheta:353925
MLKTFATICIIGMFTSSCTSKKASRTEGSHEAEQDLTMIVGTYTSGDSKGLYSFRFNEEN
GTATALSEAEVENPSYLVPSADGKFIYAVSEFSNEQAAANAFAFNKEEGTFRLLNTQKTG
GEDPCYIITNGSNVVTANYSGGSISVFPIDKDGSLLPASEVVKFKGSGADKERQEKPHLH
CVRITPDGKYLFADDLGTDQIHKFIVNPNAKADNEDVFLKEGSPASYKVEAGSGPRHLTF
APNGSYAYLINELSGTVIAFEYNDGELKEIQTIAADTVGAKGSGDIHISPDGKFLYASNR
LKADGLAIFSIHPENGMLTKVGYQLTGIHPRNFIITPNGKYLLVACRDSNVIQVYERDTD
TGLLTDIRKDIKVDKPVCIKFVP
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory