Comparing 3606747 FitnessBrowser__Dino:3606747 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4dq6A Crystal structure of plp-bound putative aminotransferase from clostridium difficile 630
33% identity, 99% coverage: 2:386/390 of query aligns to 4:387/388 of 4dq6A
6qp3A Crystal structure of the plp-bound c-s lyase from bacillus subtilis (strain 168) (see paper)
37% identity, 99% coverage: 1:387/390 of query aligns to 1:387/387 of 6qp3A
1c7oA Crystal structure of cystalysin from treponema denticola contains a pyridoxal 5'-phosphate-l-aminoethoxyvinylglycine complex (see paper)
34% identity, 99% coverage: 3:390/390 of query aligns to 5:394/394 of 1c7oA
1c7nA Crystal structure of cystalysin from treponema denticola contains a pyridoxal 5'-phosphate cofactor (see paper)
34% identity, 99% coverage: 3:390/390 of query aligns to 5:394/394 of 1c7nA
3l8aB Crystal structure of metc from streptococcus mutans
34% identity, 98% coverage: 3:386/390 of query aligns to 4:383/385 of 3l8aB
5z0qC Crystal structure of ovob (see paper)
33% identity, 99% coverage: 1:386/390 of query aligns to 1:375/379 of 5z0qC
3b1eA Crystal structure of betac-s lyase from streptococcus anginosus in complex with l-serine: alpha-aminoacrylate form (see paper)
31% identity, 98% coverage: 2:383/390 of query aligns to 4:382/387 of 3b1eA
3b1dA Crystal structure of betac-s lyase from streptococcus anginosus in complex with l-serine: external aldimine form (see paper)
31% identity, 98% coverage: 2:383/390 of query aligns to 4:382/387 of 3b1dA
3b1cA Crystal structure of betac-s lyase from streptococcus anginosus: internal aldimine form (see paper)
31% identity, 98% coverage: 2:383/390 of query aligns to 4:382/387 of 3b1cA
7qugA Crystal structure of carbon-sulfur lyase fnapatb1 from fusobacterium nucleatum subspecies animalis in complex with allyl-cysteine (see paper)
29% identity, 98% coverage: 2:385/390 of query aligns to 3:393/397 of 7qugA
8bobA Structural basis for negative regulation of the maltose system (see paper)
30% identity, 98% coverage: 3:386/390 of query aligns to 4:386/390 of 8bobA
P23256 Protein MalY; EC 4.4.1.13 from Escherichia coli (strain K12) (see 2 papers)
30% identity, 98% coverage: 3:386/390 of query aligns to 4:386/390 of P23256
6qp2A Crystal structure of the plp-bound c-s lyase from staphylococcus hominis (see paper)
30% identity, 99% coverage: 2:388/390 of query aligns to 2:380/383 of 6qp2A
6qp1B Crystal structure of the plp-bound c-s lyase in the external aldimine form from staphylococcus hominis complexed with an inhibitor, l- cycloserine. (see paper)
30% identity, 99% coverage: 2:387/390 of query aligns to 9:398/398 of 6qp1B
1u08A Crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. (see paper)
27% identity, 80% coverage: 40:352/390 of query aligns to 37:347/382 of 1u08A
5yhvB Crystal structure of an aminotransferase from mycobacterium tuberculosis
27% identity, 84% coverage: 55:382/390 of query aligns to 58:380/387 of 5yhvB
5yhvA Crystal structure of an aminotransferase from mycobacterium tuberculosis
27% identity, 84% coverage: 55:382/390 of query aligns to 65:387/394 of 5yhvA
P96847 Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
27% identity, 84% coverage: 55:382/390 of query aligns to 59:381/388 of P96847
5verA Mouse kynurenine aminotransferase iii, re-refinement of the PDB structure 3e2z (see paper)
35% identity, 37% coverage: 103:245/390 of query aligns to 101:250/410 of 5verA
Sites not aligning to the query:
5vepA Mouse kynurenine aminotransferase iii, re-refinement of the PDB structure 3e2f (see paper)
35% identity, 37% coverage: 103:245/390 of query aligns to 101:250/410 of 5vepA
Sites not aligning to the query:
>3606747 FitnessBrowser__Dino:3606747
MTFDTEIDRRNTDCIKWDKMESAFGVSPEDGLAMWIADMDFPPGPFLQEAMQGLLARADY
GYFCGLESYEDAIIGWMRDRHGWTVEREWMFTTYGLGNGIAITLNALTAPGDEVIIFSPV
YHEFAAKITKTGRVVKELPLAIVDGVYTMDFDAYAGMLSGRETMVIACSPHNPAGRVWTQ
EELTALADFCQRHDLLLISDEIHADLTFAGHTHIPMHVAAPQIADRLVMTTSASKTFNIA
GGRTGCVTIPDPDLRARFHRFFNTLDMQPNLLGVALTRAAYSPAGAAWCDALCTYLEGNA
AVFNDGVNAIPGLSAMPMQGTYLAWVDFAGTGMERPEFSERVYGTARIAATPGHTLGKGG
ESCLRFNVGMPRARVQEAVDRLADAFADLQ
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory