Comparing 3607947 FitnessBrowser__Dino:3607947 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
30% identity, 70% coverage: 124:404/404 of query aligns to 3:281/281 of P94530
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
33% identity, 51% coverage: 198:404/404 of query aligns to 84:296/296 of P68183
P02916 Maltose/maltodextrin transport system permease protein MalF from Escherichia coli (strain K12) (see 4 papers)
26% identity, 37% coverage: 198:347/404 of query aligns to 281:449/514 of P02916
>3607947 FitnessBrowser__Dino:3607947
MKLFWHGLVTGPVLGALWMVVLSTTVAVTMSFATGDPFRPAIWMSLLWGGVLGALLPLRP
GKRSVQAGAGLLVFGMVLIGVGPMVLGPEVALLSRWIAAGGLAVVFVWSLARILHEMPAG
RLNRHEFEAAVIRFLTGFGYIFFTAVVLIPFYVMVMTSLKSQQALLQNPLDFSLDLSQGW
GLFRSYAELFGQFNFGTYLWTSFFVSVLTVLITLAFSIPGAYAVARLRFAGRAAFSRSIL
LIYMVPMIVLALPIYIAFSVTGLRNTLFGIVLIYPVTTIPVALYMLQGYFRGLPAEVEEA
GLMDGLNRLQVIWKITLPLALPALASVSLYVFMIAWNEFLLAFMLLDDPSKFTLTRGIAS
LNSSEIPRQHLMAGAVIATVPIMAIFLGLERFMTKGLTAGSVKG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory