SitesBLAST

Comparing 3608193 Dshi_1598 binding-protein-dependent transport systems inner membrane component (RefSeq) to proteins with known functional sites using BLASTp with E ≤ 0.001.

query
sites
P68183

N

N

S

S

L

V

I

K

I

V

A

A

L

G

S

I

T

S

A

A

V

I

F

G

S

I

T

V

A

A

L

L

G

S

V

T

F

T

A

C

S

A

R

Y

A

A

A

F

T

A

R

R

F

M

E

R

F

F

P

P

G

G

K

K

A

A

G

T

I

L

M

L

G

K

F

G

I

M

M

L

I

I

P

F

L

Q

V

M

L

F

P

P

E

A

I

V

I

L

V

S

A

L

V

V

S

A

L

L

L

Y

V

A

V

L

L

F

L

D

Q

R

M

L

G

G

-

E

-

Y

-

I

-

P

-

F

L

I

N

G

L

L

S

N

L

T

W

H

A

G

V

G

I

V

L

I

G

F

H

A

T

Y

L

L

I

G

C

G

T

I

P

A

F

L

C

H

I

V

A

W

I

T

L

I

S

K

S

G

S

Y

F

F

S

E

G

T

L

I

D

D

R

S

S

S

L

L

E

E

E
|
E

A

A

A
|
A

I

A

D

L

L

D

G
|
G

E

A

T

T

R

P

L

W

S

Q

A

A

F

F

R

R

L

L

I

V

I

L

L

L

P
|
P

L

L

V

S

A

V

P

P

G

I

I

L

V

A

A

V

S

V

L

F

L

I

I

L

S

S

F

F

T

I

I

A

S

A

L

I

D

T

E

E

F

V

I

P

I

V

A

A

Query Sequence

>3608193 Dshi_1598 binding-protein-dependent transport systems inner membrane component (RefSeq)
MSRRVLWTYAVVYLVFLYLPVALLPIFAFNDSTIIAFPLSGFTISWFVELTQIPALHDAV
RNSLIIALSTAVFSTALGVFASRAATRFEFPGKAGIMGFIMIPLVLPEIIVAVSLLVVLL
QMGLNLSLWAVILGHTLICTPFCIAILSSSFSGLDRSLEEAAIDLGETRLSAFRLIILPL
VAPGIVASLLISFTISLDEFIIAFFLTGTDPTLPVYIWSQLRFPQKLPVIMALGTILILL
SLVLIITAEAFRRRGLRKSGQTDTGGFL

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

SitesBLAST – Find functional sites

SitesBLAST

Query Sequence

SitesBLAST's Database