Comparing 3608720 FitnessBrowser__Dino:3608720 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
4rqoB Crystal structure of l-serine dehydratase from legionella pneumophila (see paper)
49% identity, 100% coverage: 1:470/470 of query aligns to 1:448/448 of 4rqoB
2iafA Crystal structure of a fragment (residues 11 to 161) of l-serine dehydratase from legionella pneumophila
39% identity, 32% coverage: 17:165/470 of query aligns to 1:140/140 of 2iafA
>3608720 FitnessBrowser__Dino:3608720
MFLSVFDIFKVGVGPSSSHTMGPMTAAARFLDDLRGGAERIPGAGKLARLGASLHGSLAF
TGKGHATDRAVILGLIGYLPDTLDPDAAEKLEAEVRGTKRISPPGLGTLAFDPETDLVFD
YGPPLPGHANGLVLNAYDEQGNLYMTQTYYSVGGGFVVTEAELEREKSAASNDLHDEKAA
MGYPYPFGSAAEMLAMGQASGLSIAQMKRANEEAHSGPGLNKRIDAVCAVMDACIDRGLR
MDGILPGGLKVKRRAKAIHEQLLAERGQNQSQPHVANDWLSVYAMAVNEENAAGGRVVTS
PTNGAAGVVPAVIRYYRDHCIGATAEGVRTFMLTASAIGGLIKHNASISGAEMGCQGEVG
SASAMAAAGFCAAMGGTNAQIENAAEIALEHHLGMTCDPAAGLVQVPCIERNGLGAIKAV
SAASLALRGDGTHFMPLDNCIETMRQTGHDMLTKYKETSLGGLAVNLPEC
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory