Comparing 3609048 FitnessBrowser__Dino:3609048 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
P32170 L-rhamnose isomerase; RhamIso; EC 5.3.1.14 from Escherichia coli (strain K12) (see paper)
56% identity, 100% coverage: 2:411/412 of query aligns to 8:417/419 of P32170
1de6A L-rhamnose isomerase (see paper)
56% identity, 100% coverage: 2:411/412 of query aligns to 6:415/416 of 1de6A
1de5A L-rhamnose isomerase (see paper)
56% identity, 100% coverage: 2:411/412 of query aligns to 7:416/417 of 1de5A
3uvaC Crystal structure of l-rhamnose isomerase mutant w38f from bacillus halodurans in complex with mn (see paper)
52% identity, 99% coverage: 3:408/412 of query aligns to 6:401/405 of 3uvaC
>3609048 FitnessBrowser__Dino:3609048
MGYENAKAAFAEWGVDTEAALARLKTIPISMHCWQGDDVVGFEQKTGSSGGGIQATGNHP
GRARTPDELRADLEFAYAMIPGRHRLNLHAMYLDTEATPDRDEIEIAHFAPWVDWARAQG
IGLDFNPTFFAHAKADDNLTLSHPDPGIRDFWIEHGKRSREIAAGMGAALGSACVNNIWV
PDGYKDTPVDRMAARARLEASLDAMLAPPQDRARMLDAVESKLFGIGVEACTVGSHEFYM
GYAIRKGTLLCLDMGHFHPTENIADKLSAVALSLDEILLHVSRPMRWDSDHVILLDDDIL
QMAQELVSADLLGRTRIGLDFFDATISRTAAWVIGTRNMQKALLRALLMPLDRLRAAEDA
LDFTTRLVVTEEVKDLPFGAVWAEFAAREDVPNGQKLIRELDRYQAQVSGRG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory