SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 3609504 FitnessBrowser__Dino:3609504 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

Q8K4H1 Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Mus musculus (Mouse) (see paper)
30% identity, 93% coverage: 19:256/257 of query aligns to 43:298/305 of Q8K4H1

query
sites
Q8K4H1
Y
 
F
V
 
V
E
 
Q
R
 
I
W
 
G
P
 
S
R
 
Q
A
 
A
A
 
T
A
 
Q
A
 
K
F
 
A
R
 
R
E
 
A
G
 
T
A
 
R
R
 
R
G
 
N
E
 
Q
I
 
L
G
 
D
I
 
V
A
 
P
H
 
Y
G
 
G
A
 
D
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G
P
 
E
R
 
G
E
 
E
K
 
K
L
 
L
D
 
D
L
 
I
F
 
Y
L
 
F
P
 
P
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D
G
 
E
T
 
D
P
 
S
A
 
K
G
 
A
-
 
F
-
 
P
L
 
L
V
 
F
V
 
L
F
 
F
V
 
L
H
 
H
G
 
G
G
 
G
Y
 
Y
W
 
W
R
 
Q
R
 
S
F
 
G
D
 
S
R
 
K
T
 
D
D
 
D
W
 
S
S
 
A
H
 
F
L
 
M
A
 
V
A
 
N
G
 
P
P
 
L
L
 
T
A
 
A
R
 
Q
G
 
G
W
 
I
A
 
V
V
 
V
A
 
V
M
 
I
P
 
V
G
 
A
Y
 
Y
P
 
D
L
 
I
C
 
A
P
 
P
E
 
K
V
 
G
T
 
T
I
 
L
P
 
D
E
 
Q
I
 
M
T
 
V
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D
S
 
Q
V
 
V
-
 
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R
G
 
S
A
 
V
I
 
V
A
 
F
L
 
L
A
 
Q
A
 
R
R
 
R
H
 
Y
V
 
P
A
 
S
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N
P
 
E
-
 
G
I
 
I
R
 
Y
L
 
L
T
 
C
G
 
G
H
 
H
S
|
S
A
 
A
G
 
G
G
 
A
H
 
H
-
 
L
-
 
A
-
 
A
-
 
M
-
 
V
L
 
L
V
 
L
A
 
A
R
 
R
M
 
W
P
 
T
A
 
K
A
 
H
G
 
G
L
 
V
A
 
T
P
 
P
E
 
N
V
 
L
L
 
Q
S
 
G
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-
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-
A
 
-
R
 
-
I
 
F
V
 
L
P
 
L
I
 
V
S
 
S
P
 
G
V
 
I
S
 
Y
D
 
D
L
 
L
E
 
E
P
 
P
L
 
L
L
 
I
R
 
A
T
 
T
E
 
S
M
 
Q
A
 
N
E
 
D
T
 
P
L
 
L
R
 
R
L
 
M
T
 
T
P
 
L
E
 
E
I
 
D
A
 
A
A
 
Q
A
 
R
E
 
N
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S
P
 
P
L
 
Q
-
 
R
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H
-
 
L
-
 
D
-
 
V
-
 
V
-
 
P
-
 
A
H
 
Q
A
 
P
P
 
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A
 
A
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P
D
 
A
C
 
C
P
 
P
V
 
V
T
 
L
V
 
V
W
 
L
V
 
V
G
 
G
A
 
Q
E
 
H
E
x
D
R
 
S
P
 
P
V
 
E
F
 
F
L
 
H
D
 
R
Q
 
Q
A
 
S
R
 
K
W
 
E
L
 
F
A
 
Y
E
 
E
A
 
T
-
 
L
-
 
L
-
 
R
-
 
V
-
 
G
W
 
W
G
 
K
A
 
A
Q
 
S
H
 
F
R
 
Q
I
 
Q
A
 
L
A
 
R
G
 
G
R
 
V
H
 
D
H
|
H
F
 
F
D
 
D
V
 
I
I
 
I
D
 
E
D
 
N
L
 
L
A
 
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R
P
 
E
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D
G
 
D
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V
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T
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Q
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I
L
 
I
L
 
L

4po3X Crystal structure of a c4-c4 sn3 tributyrin phosphonate inhibited by esterase b from lactobacillus rhamnosis
26% identity, 75% coverage: 37:229/257 of query aligns to 39:254/309 of 4po3X

query
sites
4po3X
E
 
E
I
 
Y
G
 
R
I
 
Y
A
 
E
H
 
Q
G
 
S
A
 
A
H
 
D
P
 
P
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Q
E
 
Q
K
 
T
L
 
L
D
 
N
L
 
L
F
 
Y
L
 
Y
P
 
P
-
 
A
-
 
K
-
 
R
E
 
R
G
 
N
T
 
A
P
 
T
A
 
M
G
 
P
L
 
T
V
 
V
V
 
I
F
 
D
V
 
I
H
 
H
G
 
G
G
|
G
Y
x
G
W
 
W
R
 
F
R
 
Y
F
 
G
D
 
D
R
 
R
T
 
N
D
 
L
W
 
N
S
 
R
H
 
N
L
 
Y
A
 
C
A
 
R
G
 
Y
P
 
L
L
 
A
A
 
S
R
 
Q
G
 
G
W
 
Y
A
 
A
V
 
V
A
 
M
M
 
G
P
 
M
G
 
G
Y
 
Y
P
 
R
L
 
L
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L
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D
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V
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D
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L
-
 
R
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G
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Q
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I
P
 
Q
E
 
D
I
 
I
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F
A
 
A
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S
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L
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R
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A
 
L
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S
A
 
H
L
 
F
A
 
-
A
 
-
R
 
-
H
 
-
V
 
-
A
 
-
G
 
G
P
 
P
I
 
Q
R
 
R
-
 
G
-
 
F
-
 
D
-
 
L
-
 
D
-
 
H
-
 
V
-
 
L
L
 
L
T
 
T
G
 
G
H
 
D
S
|
S
A
|
A
G
 
G
G
 
G
H
 
H
L
 
L
V
 
A
A
 
S
R
 
L
M
 
V
P
 
A
A
 
C
A
 
I
G
 
Q
L
 
Q
A
 
S
P
 
A
E
 
E
V
 
L
-
 
Q
-
 
E
-
 
L
-
 
F
-
 
G
L
 
V
S
 
S
R
 
R
V
 
V
-
 
N
-
 
F
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N
-
 
F
A
 
T
R
 
L
I
 
V
V
 
A
P
 
L
I
 
V
S
 
C
P
 
P
V
 
V
S
 
A
D
 
E
L
 
P
E
 
S
P
 
K
L
 
L
L
 
P
R
 
M
T
 
S
E
 
D
M
 
M
A
 
A
E
 
A
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F
L
x
Y
-
 
L
-
 
D
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K
L
 
L
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S
P
 
G
E
 
G
I
 
D
A
 
Q
A
 
A
A
 
L
E
 
V
S
 
D
P
 
H
L
 
L
H
 
N
-
 
F
-
 
S
-
 
Q
-
 
V
A
 
V
P
 
K
A
 
G
P
 
L
D
 
D
C
 
L
P
 
P
V
 
P
T
 
F
V
 
M
W
 
L
V
 
I
G
 
G
A
 
G
E
 
Q
E
 
N
R
 
D
P
 
S
V
x
F
F
 
Y
L
 
L
D
 
-
Q
 
Q
A
 
S
R
 
Q
W
 
A
L
 
L
A
 
L
E
 
K
A
 
V
W
 
F
G
 
D
A
 
A
Q
 
N
H
 
H

Sites not aligning to the query:

Query Sequence

>3609504 FitnessBrowser__Dino:3609504
MDWTAAYDNASFIPGASAYVERWPRAAAAFREGARGEIGIAHGAHPREKLDLFLPEGTPA
GLVVFVHGGYWRRFDRTDWSHLAAGPLARGWAVAMPGYPLCPEVTIPEITASVRGAIALA
ARHVAGPIRLTGHSAGGHLVARMPAAGLAPEVLSRVARIVPISPVSDLEPLLRTEMAETL
RLTPEIAAAESPLHAPAPDCPVTVWVGAEERPVFLDQARWLAEAWGAQHRIAAGRHHFDV
IDDLAEPDGPLTSALLA

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory