Comparing 3610346 FitnessBrowser__Dino:3610346 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
33% identity, 98% coverage: 4:244/246 of query aligns to 4:253/253 of 1g9xB
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
33% identity, 98% coverage: 4:244/246 of query aligns to 4:253/254 of 1g6hA
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
29% identity, 98% coverage: 4:244/246 of query aligns to 2:235/240 of 6mjpA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
32% identity, 95% coverage: 3:236/246 of query aligns to 1:227/241 of 4u00A
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
30% identity, 92% coverage: 1:226/246 of query aligns to 1:222/501 of P04983
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
29% identity, 98% coverage: 4:244/246 of query aligns to 6:238/240 of 1ji0A
7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation (see paper)
32% identity, 94% coverage: 4:234/246 of query aligns to 4:230/263 of 7d0aB
7d08B Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
32% identity, 94% coverage: 4:234/246 of query aligns to 4:230/263 of 7d08B
6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp (see paper)
32% identity, 94% coverage: 4:234/246 of query aligns to 2:228/253 of 6z5uK
5x40A Structure of a cbio dimer bound with amppcp (see paper)
33% identity, 98% coverage: 1:240/246 of query aligns to 1:235/280 of 5x40A
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
29% identity, 98% coverage: 5:244/246 of query aligns to 3:235/235 of 6mhzA
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
29% identity, 98% coverage: 5:244/246 of query aligns to 3:235/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
29% identity, 98% coverage: 5:244/246 of query aligns to 3:235/238 of 6s8gA
6mbnA Lptb e163q in complex with atp (see paper)
29% identity, 98% coverage: 5:244/246 of query aligns to 4:236/241 of 6mbnA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
29% identity, 97% coverage: 5:243/246 of query aligns to 3:234/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
29% identity, 97% coverage: 5:243/246 of query aligns to 3:234/234 of 4p31A
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
29% identity, 97% coverage: 5:242/246 of query aligns to 3:233/233 of 6b8bA
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
30% identity, 89% coverage: 13:232/246 of query aligns to 10:223/240 of 4ymuJ
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
32% identity, 98% coverage: 1:242/246 of query aligns to 1:233/285 of 4yerA
3c4jA Abc protein artp in complex with atp-gamma-s
29% identity, 95% coverage: 4:236/246 of query aligns to 3:229/242 of 3c4jA
>3610346 FitnessBrowser__Dino:3610346
MTPILQTDRLGISFGGLRAVDAISFDALPNQITTVIGPNGAGKTTLFNLISGALKPGSGS
VNLDGRDVTRAGPAELQRAGLARSFQITNLFFDMTVRENLRLATQVLEPASHLMRPLRRT
GRAANKVDELIARFELHDKVHEQVGYLSHGEQRRLEIAMCLACEPKVLMLDEPTQGMSHA
DTEETEALIRGLTDHVSILLIEHDIGIVMAVSDHVIVMHQGQKIADGTPTEVRANPAVQA
AYFGHG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory