SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 370285 FitnessBrowser__MR1:370285 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

P07117 Sodium/proline symporter; Proline carrier; Proline permease; Propionate transporter from Escherichia coli (strain K12) (see 4 papers)
54% identity, 99% coverage: 1:114/115 of query aligns to 68:181/502 of P07117

query
sites
P07117
M
 
V
Y
 
F
L
 
L
G
 
S
G
 
G
L
 
I
E
 
S
E
 
E
A
 
S
W
 
W
I
 
I
G
 
A
I
 
I
G
 
G
L
 
L
V
 
T
I
 
L
G
 
G
A
 
A
W
 
W
L
 
I
N
 
N
R
 
W
L
 
K
F
 
L
V
 
V
A
 
A
K
 
G
R
 
R
L
 
L
R
 
R
I
 
V
Y
 
H
T
 
T
Q
 
E
L
 
Y
A
 
N
D
 
N
N
 
N
A
 
A
L
 
L
T
 
T
L
 
L
P
 
P
D
 
D
F
 
Y
F
 
F
E
 
T
K
 
G
R
 
R
F
 
F
H
 
E
D
 
D
K
 
K
Q
 
S
G
 
R
Y
 
I
L
 
L
K
 
R
L
 
I
V
 
I
S
 
S
A
 
A
V
 
L
T
 
V
I
 
I
L
 
L
V
 
L
F
 
F
F
 
F
T
 
T
F
 
I
Y
 
Y
A
 
C
S
 
A
S
 
S
G
 
G
M
 
I
V
 
V
G
 
A
G
 
G
A
 
A
I
 
R
L
 
L
F
 
F
E
 
E
K
 
S
V
 
T
F
 
F
G
 
G
L
 
M
D
 
S
Y
 
Y
N
 
E
V
 
T
A
 
A
L
 
L
V
 
W
I
 
A
G
 
G
S
 
A
A
 
A
I
 
A
I
 
T
V
 
I
G
 
L
Y
 
Y
T
 
T
F
 
F
I
 
I
G
 
G
G
 
G
F
 
F
L
 
L

Sites not aligning to the query:

Query Sequence

>370285 FitnessBrowser__MR1:370285
MYLGGLEEAWIGIGLVIGAWLNRLFVAKRLRIYTQLADNALTLPDFFEKRFHDKQGYLKL
VSAVTILVFFTFYASSGMVGGAILFEKVFGLDYNVALVIGSAIIVGYTFIGGFLP

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory