SitesBLAST
Comparing 5208231 FitnessBrowser__PV4:5208231 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
O59010 Glutamate transporter homolog; Glt(Ph); Sodium-aspartate symporter Glt(Ph); Sodium-dependent aspartate transporter from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 3 papers)
45% identity, 92% coverage: 14:413/433 of query aligns to 4:420/425 of O59010
- S65 (= S69) mutation to V: Strongly decreased chloride conductance.
- R276 (≠ S274) mutation to S: Increased rate of aspartate transport; when associated with R-395.
- RSS 276:278 (≠ SSS 274:276) binding L-aspartate
- M311 (= M310) mutation to A: Decreased dependence of aspartate binding on Na(+) concentration.
- T314 (= T313) binding L-aspartate
- V355 (= V354) binding L-aspartate
- D394 (= D387) binding L-aspartate
- M395 (= M388) mutation to R: Increased rate of aspartate transport; when associated with S-276.
- R397 (= R390) mutation to A: Strongly decreased affinity for aspartate.
- N401 (= N394) binding L-aspartate
- D405 (= D398) mutation to N: Strongly decreased affinity for aspartate.
6xwnB Structure of glutamate transporter homologue glttk in the presence of tboa inhibitor (see paper)
46% identity, 92% coverage: 17:413/433 of query aligns to 5:420/426 of 6xwnB
5e9sA Crystal structure of substrate-bound glutamate transporter homologue glttk (see paper)
46% identity, 92% coverage: 17:413/433 of query aligns to 5:420/427 of 5e9sA
- binding aspartic acid: R274 (≠ S274), S275 (= S275), S276 (= S276), T313 (= T313), G353 (= G353), V354 (= V354), A357 (= A357), G358 (= G358), D394 (= D387), R397 (= R390), T398 (= T391)
- binding decyl-beta-d-maltopyranoside: L194 (≠ K193), G198 (≠ M197), Y202 (≠ L201)
- binding sodium ion: Y87 (= Y94), T90 (= T97), S91 (≠ T98), S276 (= S276), G305 (= G305), A306 (≠ T306), T307 (= T307), N309 (= N309), N309 (= N309), M310 (= M310), D311 (= D311), S348 (= S348), I349 (= I349), G350 (= G350), T351 (= T351), N401 (= N394), V402 (= V395), D405 (= D398)
6zgbA Glutamate transporter homologue glttk in complex with a photo cage compound (see paper)
46% identity, 92% coverage: 17:413/433 of query aligns to 3:418/425 of 6zgbA
6zl4A The structure of glutamate transporter homologue glttk in complex with the photo switchable compound (cis) (see paper)
46% identity, 92% coverage: 17:413/433 of query aligns to 2:417/424 of 6zl4A
- binding decyl-beta-d-maltopyranoside: L3 (≠ M18), L191 (≠ K193), G195 (≠ M197), R282 (≠ K285)
- binding (2~{S},3~{S})-2-azanyl-3-[[4-[2-(4-methoxyphenyl)hydrazinyl]phenyl]methoxy]butanedioic acid: R271 (≠ S274), S272 (= S275), S273 (= S276), M307 (= M310), T310 (= T313), G353 (= G356), A354 (= A357), R394 (= R390), T395 (= T391)
6r7rA Crystal structure of the glutamate transporter homologue glttk in complex with d-aspartate (see paper)
46% identity, 91% coverage: 21:413/433 of query aligns to 2:409/416 of 6r7rA
- binding d-aspartic acid: R263 (≠ S274), S265 (= S276), M299 (= M310), T302 (= T313), T340 (= T351), G342 (= G353), V343 (= V354), G347 (= G358), D383 (= D387), R386 (= R390), T387 (= T391), N390 (= N394)
- binding decyl-beta-d-maltopyranoside: H23 (≠ E42), V212 (≠ L222), A216 (≠ I226)
6x15A Inward-facing state of the glutamate transporter homologue gltph in complex with l-aspartate and sodium ions (see paper)
45% identity, 92% coverage: 14:412/433 of query aligns to 4:419/419 of 6x15A
- binding [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate: Y4 (≠ W14), Y7 (≠ W17), F46 (≠ I50), F46 (≠ I50), P75 (≠ D79), L91 (≠ G96), F95 (≠ I100), L130 (≠ I135), I133 (≠ T138), I159 (≠ V164), Y167 (≠ L172), K196 (= K193), G200 (≠ M197), I207 (≠ Y204), F210 (= F207), L250 (= L248), I262 (≠ F260), M269 (≠ L267), T334 (= T333), V335 (≠ W334), G336 (≠ V335), T340 (= T339), L343 (= L342), M399 (≠ V392)
- binding aspartic acid: S277 (= S275), S278 (= S276), T314 (= T313), G354 (= G353), A358 (= A357), G359 (= G358), D394 (= D387), R397 (= R390), T398 (= T391)
- binding sodium ion: Y89 (= Y94), T92 (= T97), S93 (≠ T98), G306 (= G305), T308 (= T307), N310 (= N309), N310 (= N309), M311 (= M310), D312 (= D311), S349 (= S348), I350 (= I349), T352 (= T351), N401 (= N394), V402 (= V395), D405 (= D398)
6x14A Inward-facing state of the glutamate transporter homologue gltph in complex with tfb-tboa (see paper)
45% identity, 91% coverage: 14:409/433 of query aligns to 1:413/413 of 6x14A
- binding [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate: Y4 (≠ W17), G66 (= G73), V83 (≠ F91), I157 (≠ A165), Y164 (≠ L172), K193 (= K193), T305 (= T307), I306 (= I308), I347 (= I349)
- binding (2~{S},3~{S})-2-azanyl-3-[[3-[[4-(trifluoromethyl)phenyl]carbonylamino]phenyl]methoxy]butanedioic acid: I13 (= I26), M199 (= M199), S275 (= S276), T311 (= T313), G356 (= G358), L384 (≠ A380), D391 (= D387), R394 (= R390)
2nwwA Crystal structure of gltph in complex with tboa (see paper)
46% identity, 90% coverage: 21:409/433 of query aligns to 2:407/407 of 2nwwA
6bavA Crystal structure of gltph r397c in complex with s-benzyl-l-cysteine (see paper)
46% identity, 90% coverage: 21:409/433 of query aligns to 3:408/409 of 6bavA
6bauA Crystal structure of gltph r397c in complex with l-cysteine (see paper)
46% identity, 90% coverage: 21:409/433 of query aligns to 3:408/408 of 6bauA
- binding cysteine: S270 (= S276), M303 (= M310), T306 (= T313), A345 (= A352), G346 (= G353), V347 (= V354), G351 (= G358), D386 (= D387), C389 (≠ R390), T390 (= T391), N393 (= N394)
6bmiA Crystal structure of gltph r397c in complex with l-serine (see paper)
43% identity, 90% coverage: 21:409/433 of query aligns to 3:396/396 of 6bmiA
7awmA Structure of the thermostabilized eaat1 cryst mutant in complex with l-asp, three sodium ions and the allosteric inhibitor ucph101 (see paper)
38% identity, 86% coverage: 51:422/433 of query aligns to 57:412/412 of 7awmA
- binding 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile: S88 (≠ M83), G89 (= G84), G92 (= G87), A95 (≠ S90), V96 (≠ F91), Y99 (= Y94), M163 (≠ V164), F167 (≠ I168), F293 (= F300), V297 (≠ L304)
- binding aspartic acid: S268 (= S275), S269 (= S276), T306 (= T313), G346 (= G353), I347 (≠ V354), A350 (= A357), G351 (= G358), D380 (= D387), R383 (= R390), T384 (= T391)
5mjuA Structure of the thermostabilized eaat1 cryst mutant in complex with the competititve inhibitor tfb-tboa and the allosteric inhibitor ucph101 (see paper)
38% identity, 84% coverage: 51:413/433 of query aligns to 49:393/397 of 5mjuA
- binding 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile: L72 (≠ V74), S80 (≠ M83), G81 (= G84), G84 (= G87), Y91 (= Y94), M156 (≠ V164), F160 (≠ I168), F286 (= F300), V290 (≠ L304)
- binding (2~{S},3~{S})-2-azanyl-3-[[3-[[4-(trifluoromethyl)phenyl]carbonylamino]phenyl]methoxy]butanedioic acid: I64 (≠ V66), I148 (= I156), S262 (= S276), S263 (≠ A277), A292 (≠ T306), T293 (= T307), M296 (= M310), T299 (= T313), G329 (= G350), A336 (= A357), G337 (= G358), D366 (= D387), R369 (= R390), N373 (= N394)
7xr6A Structure of human excitatory amino acid transporter 2 (eaat2) in complex with way-213613 (see paper)
36% identity, 84% coverage: 51:413/433 of query aligns to 47:419/424 of 7xr6A
- binding (2S)-2-azanyl-4-[[4-[2-bromanyl-4,5-bis(fluoranyl)phenoxy]phenyl]amino]-4-oxidanylidene-butanoic acid: S280 (= S275), S281 (= S276), T318 (= T313), G363 (= G358), M367 (≠ L362), V385 (≠ A380), D388 (= D383), R395 (= R390), T396 (= T391)
- binding dodecyl beta-D-glucopyranoside: W389 (≠ R384)
- binding cholesterol hemisuccinate: R80 (= R85), R84 (≠ K89), I95 (= I100), I252 (≠ V247)
Sites not aligning to the query:
7xr4A Structure of human excitatory amino acid transporter 2 (eaat2) in complex with glutamate (see paper)
36% identity, 84% coverage: 51:413/433 of query aligns to 46:420/425 of 7xr4A
P31596 Excitatory amino acid transporter 2; GLT-1; Sodium-dependent glutamate/aspartate transporter 2; GLUT-R; Solute carrier family 1 member 2 from Rattus norvegicus (Rat) (see paper)
33% identity, 87% coverage: 51:425/433 of query aligns to 82:517/573 of P31596
- K298 (vs. gap) mutation K->H,R: Normal transporter activity.; mutation K->N,T: Reduced transporter activity.
- H326 (= H239) mutation H->N,T,K,R: No transporter activity.
P43006 Excitatory amino acid transporter 2; GLT-1; Sodium-dependent glutamate/aspartate transporter 2; Solute carrier family 1 member 2 from Mus musculus (Mouse) (see paper)
33% identity, 87% coverage: 51:425/433 of query aligns to 82:517/572 of P43006
Sites not aligning to the query:
- 38 modified: S-palmitoyl cysteine; C→S: Severely impairs glutamate uptake activity.
Q10901 Excitatory amino acid transporter; Sodium-dependent glutamate/ aspartate transporter from Caenorhabditis elegans (see paper)
33% identity, 93% coverage: 26:428/433 of query aligns to 29:480/503 of Q10901
- N177 (vs. gap) modified: carbohydrate, N-linked (GlcNAc...) asparagine
- N187 (≠ S153) modified: carbohydrate, N-linked (GlcNAc...) asparagine
7vr7A Inward-facing structure of human eaat2 in the way213613-bound state (see paper)
37% identity, 83% coverage: 51:409/433 of query aligns to 39:402/402 of 7vr7A
- binding (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en: S57 (= S69), L58 (= L70), L65 (≠ M77), V339 (≠ I349), G340 (= G350), S343 (≠ G353), I344 (≠ V354)
- binding cholesterol: W188 (≠ K200), I227 (≠ A237), F250 (= F260), W257 (≠ L267), M379 (≠ A389), S382 (≠ V392)
- binding (2S)-2-azanyl-4-[[4-[2-bromanyl-4,5-bis(fluoranyl)phenoxy]phenyl]amino]-4-oxidanylidene-butanoic acid: S266 (= S276), M300 (= M310), T303 (= T313), Y306 (= Y316), G348 (= G358), L349 (= L359), M352 (≠ L362), I366 (≠ V376), L369 (≠ I379), V370 (≠ A380), D373 (= D383), D377 (= D387), R380 (= R390), T381 (= T391), N384 (= N394)
Sites not aligning to the query:
Query Sequence
>5208231 FitnessBrowser__PV4:5208231
MMRQQTSSWLGRAWSGWMSVPLWLQILIGMLLGICAGLGLGEQAVLLKPIGTLFVNTIKM
LIVPLVFCSLIVGVTSMQDTAKMGRIGFKSFAFYLGTTSIAITLGLAVGHIMQPGAGLAM
TSAESHNAVKEVPSIMETLINIVPTNPIAALASGQILQVIVFAVALGIALVLIGDHGKPA
IKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGMDMLMPLIKVILAVYIGCALHI
IGFYSLVLTFVAKLNPMQFFKGISNALAVAYTTSSSAGTLPASMKCASESLGINKKISSF
VLPLGTTINMDGTALYQGVTALFVAQAFGIDLTWVDYITIILTATLASIGTAGVPGAGLV
MLTLVLTTVGLPLEGVAIIAGIDRILDMARTVVNVSGDLVATTVIAKSEDELDLEHYNAD
AEQSQILAERLDS
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory