Comparing 5208457 FitnessBrowser__PV4:5208457 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
1y56B Crystal structure of l-proline dehydrogenase from p.Horikoshii (see paper)
23% identity, 79% coverage: 53:393/434 of query aligns to 22:352/374 of 1y56B
Sites not aligning to the query:
Q8GAI3 4-methylaminobutanoate oxidase (formaldehyde-forming); MABO; Demethylating gamma-N-methylaminobutyrate oxidase; Gamma-N-methylaminobutyrate oxidase 1; EC 1.5.3.19 from Paenarthrobacter nicotinovorans (Arthrobacter nicotinovorans) (see paper)
25% identity, 63% coverage: 38:309/434 of query aligns to 28:285/824 of Q8GAI3
>5208457 FitnessBrowser__PV4:5208457
MTTKRPVHSDQYPDSFYHATANALEALPQLKERISADVCIVGGGFSGINTAIELAERGFE
VVLLEAKRIGWGASGRNGGELIRGIGHNVEQFRNEIGSEGVEAIERMGFEAVEIVRNRVA
KHNIDCNLQMGYCDLATKPRHMKELAADYQEMLHQGREGFKLLEKHQLGEVIGSDLYCGA
LVDMNSGHLHPLNLALGEAKVARSLGVKMFEYSAATKIVKGERPCVHTEHGRVDCRYLVL
AGNAYIGHELNGYIGGKVLPAGSYLLATEPLSQEMCDEIIPQNMAFADMRIDLDYFHLSQ
DNRLLFGGLCTYSGKDPKDIDAALRPNLEKVFPQLKGVKIEYEWGGMIGIGANRLPQIGR
LPDCPNILYAQAYAGHGVNATHMAARLIGEALTAQAERFDIFDRVQHMTFPGGPRFRSPM
LAAGMLYHRLKDLF
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory