Comparing 5209772 FitnessBrowser__PV4:5209772 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
P76216 N-succinylarginine dihydrolase; EC 3.5.3.23 from Escherichia coli (strain K12) (see paper)
54% identity, 100% coverage: 1:445/445 of query aligns to 1:441/447 of P76216
1ynhB Crystal structure of n-succinylarginine dihydrolase, astb, bound to substrate and product, an enzyme from the arginine catabolic pathway of escherichia coli (see paper)
54% identity, 99% coverage: 4:445/445 of query aligns to 3:440/440 of 1ynhB
1yniA Crystal structure of n-succinylarginine dihydrolase, astb, bound to substrate and product, an enzyme from the arginine catabolic pathway of escherichia coli (see paper)
54% identity, 99% coverage: 4:445/445 of query aligns to 3:440/440 of 1yniA
>5209772 FitnessBrowser__PV4:5209772
MKHYEANFDGLVGPTHNYAGLSYGNVASLNNAAAISSPKAAAKQGLKKAKALADLGLAQG
MLAPQERPDLHTLRRIGFSGTDAEVLNKAAKQAPALLRACCSASSMWTANAATVSPSADT
HDGKIHFTPANLVDKLHRSIEPVTTGNILAATFNNSRYFHHHQHLPEHVSFGDEGAANHT
RLCSEYGHAGIELFVYGQEATNPNAPKPKKYPARQTLEASQAIARLHQLDDESSVFIQQN
PDVIDQGVFHNDVIAVGNQNVLFYHEQAFVDTQKKLAEIQDKFNGKELHFIEVPTAKVGI
QDAVKSYLFNTQIVTLPNGEMAIIAPTNCQENEAVYAYLNELVTLGTPIKQVHYFDVKQS
MQNGGGPACLRLRVAMNETELAAVNPNTLMNDELFNRLNLWVEKHYRDELAIDDLADPQL
IVESRTALDELTQIMKLGSVYQFQK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory