Comparing 6936606 FitnessBrowser__SB2B:6936606 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
7d50B Spua mutant - h221n with glutamyl-thioester (see paper)
42% identity, 92% coverage: 11:256/267 of query aligns to 7:253/255 of 7d50B
7d53A Spua mutant - h221n with glu (see paper)
42% identity, 92% coverage: 11:256/267 of query aligns to 1:247/249 of 7d53A
7d4rB Spua native structure (see paper)
39% identity, 91% coverage: 14:256/267 of query aligns to 2:215/215 of 7d4rB
P76038 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD; Gamma-Glu-GABA hydrolase; EC 3.5.1.94 from Escherichia coli (strain K12) (see paper)
40% identity, 90% coverage: 13:252/267 of query aligns to 7:245/254 of P76038
6vtvB Crystal structure of puud gamma-glutamyl-gamma-aminobutyrate hydrolase from e. Coli
40% identity, 90% coverage: 13:252/267 of query aligns to 5:243/252 of 6vtvB
3fijA Crystal structure of a uncharacterized protein lin1909
37% identity, 72% coverage: 63:253/267 of query aligns to 37:222/224 of 3fijA
O33341 Putative glutamine amidotransferase Rv2859c; EC 2.4.2.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
35% identity, 78% coverage: 50:256/267 of query aligns to 106:300/308 of O33341
1vcnA Crystal structure of t.Th. Hb8 ctp synthetase complex with sulfate anion (see paper)
32% identity, 46% coverage: 111:234/267 of query aligns to 353:486/506 of 1vcnA
Sites not aligning to the query:
>6936606 FitnessBrowser__SB2B:6936606
MPLQQESARQERKPVILMSMGQQDRNGHAYQVMTHKYMQPVVDISDCIPLLIPTCFGVAD
IEQYLDMADGVYLSGAASNIDPSLYGQENLTPEKKQDLARDLVDIALIKGAVKRGLPILG
ICRGMQEMNIAFGGDLYQKVHDEDHLNDHREDPDTPPDVQYGASHSISMVKGSWLHKLLG
DTIEVNSLHGQGIKTLGKGLEALALAEDGLVEALHAPYLPQFTLGVQWHPEWKALENPDS
IKIFKAFGEACRRRAGSALDLRIDKAS
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory