Comparing 6938544 FitnessBrowser__SB2B:6938544 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
5i39A High resolution structure of l-amino acid deaminase from proteus vulgaris with the deletion of the specific insertion sequence (see paper)
23% identity, 84% coverage: 35:401/435 of query aligns to 24:374/383 of 5i39A
1y56B Crystal structure of l-proline dehydrogenase from p.Horikoshii (see paper)
22% identity, 81% coverage: 51:402/435 of query aligns to 20:360/374 of 1y56B
Sites not aligning to the query:
>6938544 FitnessBrowser__SB2B:6938544
MANKSPIHSDKYPDSFYFATAKELFQYPVLDSAIEVDVCVVGGGFSGLNTAIELRQKGFN
VALLEAKRVGWGASGRNGGELIRGIGHGLEQFHNTIGQEGIDAITQMGFEAVEIVRKRIA
DHNIDCDLAMGYCDLAVKPRHMAELAEEFEHLKTAGYRQDIKLLQKADLCDVIGSDCYQG
ALVDMGSGHLHPLNLALGEARVARELGVQIFEYSAATNIIKGDKPRVITEKGEVNCRYLV
LAGNAYIGHKLEPYVGGKVLPAGSYLLATEPLSPELQREIIPQNMAFADMRIALDYFHLS
ADGRLLFGGLCTYSGKDPSDIEAALRPNLERVFPKLKGVRIDYQWGGMIGIGANRLPQLG
RLPDAPNIFFAQAYSGHGVNATHMMAKLLAEAIAGQAERFDVFAKVKHMTFPGGPALRSP
LLAAGMLYHRFMDIF
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory