Comparing 6938668 FitnessBrowser__SB2B:6938668 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
4rqoB Crystal structure of l-serine dehydratase from legionella pneumophila (see paper)
51% identity, 97% coverage: 12:459/464 of query aligns to 3:445/448 of 4rqoB
Sites not aligning to the query:
2iafA Crystal structure of a fragment (residues 11 to 161) of l-serine dehydratase from legionella pneumophila
43% identity, 31% coverage: 26:167/464 of query aligns to 1:140/140 of 2iafA
>6938668 FitnessBrowser__SB2B:6938668
MASPLYLESSMFSTFDIYKIGIGPSSSHTVGPMKAAKAFVDRLDTLNLSGRIDSLKADVY
GSLSLTGKGHHTDIAIVLGLMGQSPECVDIDAIGATIAAVNESETLWLESGRPVRFARDA
MVFHPHALPLHENAMTLSAFAGDELLASNTYYSIGGGFVVEEADFGKAQIGETLFPYPFE
DAERLVQLCRAEGVSISTLMLANEKDCHSEEYIYRGFRDIWLTMKQAIDRGCHTEGVLAG
PLRVPRRAPALLKQLETSGRISADPMEIVDWVNLFALAVSEENAAGGRVVTAPTNGAAGI
IPAVMAYFDRFIQPLGQKEYSRFLLASAAIGSLYKRNASISGAEVGCQGEVGVACSMAAA
GLAELMGASPAQVCMAAEIAMEHNLGLTCDPVAGQVQVPCIERNAIAAVKAVNAARMALR
RTSDPRVSLDKVIATMYETGKDMHAKYRETSLGGLAIKVTSICD
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory