SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 7025533 FitnessBrowser__ANA3:7025533 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>7025533 FitnessBrowser__ANA3:7025533
MNLVLILIGVIAFIVIATSKFKLHPFLTLILAAFIAAFAYGLPSGDIAKTITTGFGNILG
YIGLVIVLGTIIGIILEKSGAAITMADVVIKVLGKRFPTLTMSIIGYLVSIPVFCDSGFV
ILNSLKQSMANRMKVSSVSMSVALATGLYATHTFVPPTPGPIAAAGNLGLESNLGLVIGV
GLLVAAVAALAGMFWANRFASVEPDGEGAEELKAQAADFEALKQSYGTLPSPLKAFAPIF
VPILLICLGSIANFPSAPLGKEGLFSLLVFLGQPVNALLIGLFLSLLLLKSDNKIAEFSE
RISQGLVAAAPIILITGAGGAFGAVLKATPIGDFLGSSLSALGVGIFMPFIVAAALKSAQ
GSSTVALVATSALVAPMLGDIGLGSDMGRVLTVMAIGAGAMTVSHANDSFFWVVTQFSRM
SVKQAYKAQTMATLIQGVTAMLTVYVLSLVLL

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory