SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 7025946 FitnessBrowser__ANA3:7025946 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
25% identity, 56% coverage: 60:211/271 of query aligns to 85:234/296 of P68183

query
sites
P68183
V
 
L
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W
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N
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K
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A
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I
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T
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T
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C
A
 
A
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Y
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A
M
 
F
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A
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R
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M
K
 
R
R
 
F
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P
W
 
G
A
 
K
K
 
A
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T
T
 
L
L
 
L
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K
N
 
G
M
 
M
I
 
L
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I
A
 
F
P
 
Q
L
 
M
V
 
-
M
 
F
P
 
P
E
 
A
V
 
V
I
 
L
T
 
S
G
 
L
L
 
V
S
 
A
L
 
L
L
 
Y
L
 
A
L
 
L
F
 
F
V
 
D
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R
M
 
L
A
 
G
D
 
E
L
 
Y
L
 
I
G
 
P
W
 
F
P
 
-
K
 
-
E
 
-
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I
G
 
G
M
 
L
V
 
N
T
 
T
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-
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-
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-
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-
H
 
H
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G
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G
F
 
V
C
 
I
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F
A
 
A
Y
 
Y
V
 
L
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G
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G
V
 
I
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A
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H
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E
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D
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S
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E
E
|
E
A
 
A
A
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A
M
 
A
D
 
L
L
 
D
G
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G
A
 
A
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T
P
 
P
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W
K
 
Q
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A
F
 
F
F
 
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L
P
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P
M
 
L
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P
 
P
A
 
I
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L
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A
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A
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V
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P
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A
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S

Query Sequence

>7025946 FitnessBrowser__ANA3:7025946
MKKLSFSSVMLWFGLFFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFADQQILDAV
WTSLRIAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLF
VHMADLLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAMDLGATPLKTF
FLITVPMISPALVAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRLGVSPKINAL
ATLIILCVSLIAFLSWYMARRAEKRERMPLN

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory