Comparing 7026738 FitnessBrowser__ANA3:7026738 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
1ordA Crystallographic structure of a plp-dependent ornithine decarboxylase from lactobacillus 30a to 3.1 angstroms resolution (see paper)
57% identity, 100% coverage: 3:719/720 of query aligns to 3:718/730 of 1ordA
1c4kA Ornithine decarboxylase mutant (gly121tyr) (see paper)
57% identity, 100% coverage: 3:719/720 of query aligns to 3:716/728 of 1c4kA
6q6iA Lysine decarboxylase a from pseudomonas aeruginosa
35% identity, 92% coverage: 47:710/720 of query aligns to 78:741/749 of 6q6iA
6q7lA Inducible lysine decarboxylase (see paper)
32% identity, 97% coverage: 10:710/720 of query aligns to 29:703/711 of 6q7lA
3n75A X-ray crystal structure of the escherichia coli inducible lysine decarboxylase ldci (see paper)
32% identity, 97% coverage: 10:710/720 of query aligns to 29:703/711 of 3n75A
2vycA Crystal structure of acid induced arginine decarboxylase from e. Coli (see paper)
33% identity, 85% coverage: 90:701/720 of query aligns to 121:741/755 of 2vycA
P28629 Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli (strain K12) (see paper)
33% identity, 85% coverage: 90:701/720 of query aligns to 121:741/755 of P28629
5xx1G Crystal structure of arginine decarboxylase (adia) from salmonella typhimurium (see paper)
31% identity, 85% coverage: 90:701/720 of query aligns to 122:721/735 of 5xx1G
>7026738 FitnessBrowser__ANA3:7026738
MKSLKVAASLSVRSCFEIDREVVNVLTTDFCDVGAAVVSVDDVKNGIVEKIKNTGLKLPI
FVSVCCEETFPDDICSSITGVFELCGSNTDFYGKQVETAVQKYEQALLPPFFGTLKKYVE
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETIFRSDMCNADVKLGDLLIHEGAPLDAQ
KYAAKVFNADKTYFVLNGTSSSNKVATNALLAKGDLVLFDRNNHKSNHHGALIQAGATPI
YLETARNPFGFIGGIDAHCFQESYLREQIRAVAPERADEQRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMNDCSPLLLELTPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDSHIKGQARYCNHKRFNNAFMMHASTSPFYPLFAALDVNAKMHEGASGRYL
WREAVKAGIEARKLLLKKCKYIKPFIPSMIEGRPWQDYPTEQMADDLRFFEFEPGQKWHS
FDGYEKGQYFVDPCKFLLTTPGIDAETGKYTEFGIPATILANFLRENNIIPEKCDLNSIL
FLMTPAEDMAKMQHLVSQISRFEKLVDEDAPLSEVLPNVYNANKARYKDYTIRQLCQEMH
NLYVSHDVKQLQKEMFRQAHFPTKVMDPQEANLEFIRGKVELVPLSQIEGRIAAEGALPY
PPGVLCVVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYLETPPDGKIQALGYVLNK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory