Comparing 8499893 DvMF_0658 binding-protein-dependent transport systems inner membrane component (RefSeq) to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
26% identity, 95% coverage: 14:277/277 of query aligns to 12:280/281 of P94530
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
26% identity, 89% coverage: 31:277/277 of query aligns to 30:295/296 of P68183
>8499893 DvMF_0658 binding-protein-dependent transport systems inner membrane component (RefSeq)
MSQTNIYDSRGLARVLDTAAAWTLAVLWALPLLYAVWTAFHPSEFSTRFTLAAPLTLDNF
RAAWDAAPFARYLVNTVLLVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVLMQLMIM
PDVLVVENYRTMSAIGVLDSTLAIGLPYMASAFGIFLLRQTFKSIPKELDEAAAVEGAST
LQILWKVYVPLGKPVYLAYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGV
DWSIITAATLMTSGPLLIGFLLFQRQFVQSFMRAGIK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory