SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 8500137 DvMF_0900 Glucokinase (RefSeq) to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

1sz2B Crystal structure of e. Coli glucokinase in complex with glucose (see paper)
28% identity, 96% coverage: 4:354/365 of query aligns to 5:308/320 of 1sz2B

query
sites
1sz2B
L
 
L
A
 
V
A
 
G
D
 
D
I
 
V
G
 
G
G
 
G
T
 
T
N
 
N
S
 
A
R
 
R
F
 
L
A
 
A
L
 
L
Y
 
C
E
 
D
A
 
-
G
 
-
G
 
-
L
 
I
A
 
A
R
 
S
G
 
G
H
 
E
V
 
I
P
 
S
R
 
Q
P
 
A
Q
 
K
D
 
T
R
 
-
L
 
Y
C
 
S
A
 
G
V
 
L
R
 
D
L
 
Y
P
 
P
T
 
S
A
 
L
G
 
-
T
 
-
A
 
-
S
 
-
F
 
-
A
 
-
D
 
E
L
 
A
L
 
V
R
 
I
R
 
R
A
 
V
A
 
Y
A
 
L
E
 
E
E
 
E
P
 
H
G
 
K
L
 
V
F
 
E
T
 
V
S
 
K
P
 
D
A
 
G
L
 
-
L
 
-
V
 
C
L
 
I
A
 
A
V
 
I
A
 
A
G
x
C
P
|
P
V
 
I
R
 
T
G
 
G
G
 
-
R
 
D
R
 
W
C
 
V
T
 
A
P
 
M
P
 
T
N
 
N
I
 
H
P
 
T
W
 
W
A
 
A
V
 
F
D
 
S
L
 
I
D
 
A
E
 
E
P
 
M
A
 
K
L
 
-
R
 
K
A
 
N
P
 
L
G
 
G
M
 
F
P
 
S
P
 
H
L
 
L
P
 
E
P
 
-
V
 
-
L
 
-
L
 
I
I
 
I
N
|
N
D
|
D
F
 
F
V
 
T
A
 
A
Q
 
V
A
 
S
Y
 
M
A
 
A
C
 
I
L
 
-
R
 
-
P
 
-
A
 
-
A
 
-
P
 
-
D
 
-
G
 
-
P
 
P
V
 
M
A
 
L
P
 
K
V
 
K
A
 
E
P
 
H
V
 
L
A
 
I
P
 
Q
D
 
F
G
 
G
P
 
G
D
 
A
E
 
E
P
 
P
D
 
-
G
 
-
P
 
-
V
 
-
V
 
-
P
 
-
D
 
-
M
 
-
L
 
-
N
 
-
M
 
-
L
 
-
D
 
-
V
 
-
L
 
-
D
 
-
G
 
-
H
 
-
P
 
-
V
 
V
P
 
E
D
 
G
A
 
K
P
 
P
I
 
I
A
 
A
V
 
V
V
 
Y
G
 
G
A
 
A
G
 
G
T
 
T
G
 
G
L
|
L
G
|
G
K
 
V
C
 
A
L
 
H
L
 
L
L
 
V
P
 
H
A
 
V
S
 
D
G
 
K
D
 
R
G
 
W
M
 
V
P
 
S
P
 
-
R
 
-
V
 
-
L
 
L
P
 
P
S
 
G
E
|
E
G
 
G
G
 
G
H
|
H
A
 
V
L
 
D
F
 
F
P
 
A
F
 
P
T
 
N
D
 
S
E
 
E
R
 
E
E
 
E
M
 
A
A
 
I
F
 
I
A
 
L
A
 
E
F
 
I
V
 
L
R
 
R
A
 
A
H
 
E
T
 
I
G
 
G
R
 
-
Q
 
H
V
 
V
I
 
S
G
 
A
D
x
E
L
 
R
V
 
V
V
 
L
S
 
S
G
 
G
P
 
P
G
 
G
L
 
L
-
 
V
R
 
N
L
 
L
L
 
Y
H
 
R
A
 
A
F
 
I
H
 
V
T
 
K
G
 
A
Q
 
D
W
 
N
L
 
R
E
 
L
P
 
P
A
 
E
E
 
N
V
 
L
A
 
K
A
 
P
R
 
K
L
 
D
A
 
I
T
 
T
G
 
E
A
 
R
P
 
A
G
 
L
A
 
A
D
 
D
S
 
S
D
 
C
L
 
T
A
 
D
L
 
C
P
 
R
Q
 
R
V
 
A
L
 
L
S
 
S
W
 
L
F
 
F
A
 
C
R
 
V
F
 
I
Y
 
M
G
 
G
R
 
R
A
 
F
C
 
G
R
 
G
D
 
N
Y
 
L
V
 
A
L
 
L
E
 
N
T
 
L
L
 
G
A
 
T
L
 
F
G
 
G
G
 
G
V
 
V
F
 
F
I
 
I
S
 
A
G
 
G
G
 
G
V
 
I
A
 
V
A
 
P
A
 
R
T
 
F
P
 
L
A
 
E
L
 
F
V
 
F
T
 
K
H
 
A
P
 
S
A
 
G
F
 
F
A
 
R
E
 
A
A
 
A
F
 
F
R
 
E
Q
 
D
S
 
K
D
 
G
T
 
R
H
 
F
A
 
K
D
 
E
L
 
Y
L
 
V
R
 
H
A
 
D
V
 
I
P
 
P
V
 
V
R
 
Y
L
 
L
V
 
I
R
 
V
S
 
H
P
 
D
D
 
N
A
 
P
G
 
G
L
 
L
L
 
L
G
 
G
A
 
S

Query Sequence

>8500137 DvMF_0900 Glucokinase (RefSeq)
MRVLAADIGGTNSRFALYEAGGLARGHVPRPQDRLCAVRLPTAGTASFADLLRRAAAEEP
GLFTSPALLVLAVAGPVRGGRRCTPPNIPWAVDLDEPALRAPGMPPLPPVLLINDFVAQA
YACLRPAAPDGPVAPVAPVAPDGPDEPDGPVVPDMLNMLDVLDGHPVPDAPIAVVGAGTG
LGKCLLLPASGDGMPPRVLPSEGGHALFPFTDEREMAFAAFVRAHTGRQVIGDLVVSGPG
LRLLHAFHTGQWLEPAEVAARLATGAPGADSDLALPQVLSWFARFYGRACRDYVLETLAL
GGVFISGGVAAATPALVTHPAFAEAFRQSDTHADLLRAVPVRLVRSPDAGLLGAALYGAL
NRPAH

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory