Comparing 8501197 DvMF_1931 TRAP dicarboxylate transporter, DctM subunit (RefSeq) to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
8b01B Cryo-em structure of the tripartite atp-independent periplasmic (trap) transporter siaqm from photobacterium profundum in a nanodisc (see paper)
36% identity, 64% coverage: 232:639/640 of query aligns to 12:418/427 of 8b01B
>8501197 DvMF_1931 TRAP dicarboxylate transporter, DctM subunit (RefSeq)
MSERNTFSWATANEWLEKPFLVAGLMVMILAITYQTGFRYSMATINEMLNDAGTVAFLAR
FVDVEGLKAGLQRIIGWSVWSEELSRYLFIWISYLAVPLAIMKRSNIRVDVLCAKLPPRA
QGMAWVVVDVCTLVLTGALCYMGFGHVQMQIAMPQTTPAMGIKYFIPYMILPVGFFLMTL
RTVQDLVRQARTMPALDVVGGVACGLLLFLPVLLSDQWSAVWLLFGYFVLFLLVGVPIAF
SLGLATIATVLGAGTLPLEYLAQIAFVSIDSFPILAIPFFIAAGVFMGAGGLSRRLLALG
DELVGALPGGMALATIVTCMFFAAISGSGPATVAAIGSITIPAMVERGYDKFFAAAVVAS
AGCIGVMIPPSNPFVVYGVAAQASVGKLFLAGIVPGVLCGLALMAVAYYISLKKGWRGEA
RHRDFRSVMQAMWEAKWALLVPVIVLGGIYGGIMTPTEAAAVSALYGMIVGLFIYREITW
RRMWDCMVESAQTSSVIIVLMAMATLFGNIMTIEQVPDHIAAMILGVTSNKIAILLLINV
FLLWVGTFMEALAAIVIITPILLPLVTQVGVDPIHFGVIMVVNLAIGFITPPVGVNLFVA
SSISKVSIGDVVRAAWPFLLVMIALLMAITYIPAISLCLL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory