Comparing 8501272 FitnessBrowser__Miya:8501272 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
6u7lA 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. (see paper)
28% identity, 94% coverage: 5:366/387 of query aligns to 110:437/460 of 6u7lA
>8501272 FitnessBrowser__Miya:8501272
MTANTFLGYRRENGRVGVRNHVVILPLDDLSNAASEAVANNVKGTMALPHPYGRLQFGED
LELHFRTLIGVGSNPNVAAVVVIGIEPQWTNRIVEGIAKTGKPVAGFSIEQNGDHNTICN
ASRKAKEFMHWATELQRVECPVSDLWVSTKCGESDTTSGIASNPTVGNAFDKLYEQGCTL
LFGETTELTGGEHLVLERCANDEVRKQFQFFFDRYAKLVDDHKTSDLSDSQPTKGNIEGG
LTTIEEKALGNIQKIGRKAPVVGCLDKAEAPTGPGLWFMDSSSAAAEMVTLCAAAGFVVH
LFPTGQGNVIGNPILPVVKLCANPRTVRTMSEHIDVDVSGILRKELTMDGAGDKLVEMAI
RTANGRNTAAEVLGHREFVLTRLYESA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory