Comparing 8502073 DvMF_2786 polar amino acid ABC transporter, inner membrane subunit (RefSeq) to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
4ymwC Crystal structure of an amino acid abc transporter with histidines (see paper)
33% identity, 34% coverage: 387:587/596 of query aligns to 16:214/214 of 4ymwC
4ymtC Crystal structure of an amino acid abc transporter complex with arginines (see paper)
33% identity, 34% coverage: 387:587/596 of query aligns to 16:214/215 of 4ymtC
>8502073 DvMF_2786 polar amino acid ABC transporter, inner membrane subunit (RefSeq)
MIRYWLEKTWVQNAVLISLATFAIYYCGWVFDFGYEFKWSMLFTRNETYGVVMGAEILKG
LANTVRISLISSALALLLGTMLGLARLSLFRPLRVTATCVIEFFRNTPLLIQLFFWYFAF
PAILPDNAREALFSIQFEFWCATIGLSIYTASFMAEVIRAGLQSIPKGLLEAAYSSGLSY
FQVLRTIILPLAFRAIIPPLGSEFLNNMKNSSLAMVVGVAELTWHAQQVESLTFKGFEAT
SAATVLYLSLSLIISFILNGVNGRMRLDTAPGRSIPVLVVGALLTPLGLIRRMFIRPVTR
ALRARRRAAAQTTYTPLAAMLHQWGGYAARAAVLAGKGLFVALLAGLLYSVGKGLLGFQW
HVVFENLRSLLIWHFPTGRPDEMFLGLGGLAYSLLMAVIAISVSFFIGLAVGVGRSSSNR
VFRIPCLLYIELIRGNPLIIVIFWVYFFIPVMFGTTLNVFWSATWALTAFTGAYIAEIVR
TGIQNIPAGQVEAAYSTGLTYLQAMRRIVLPQALKQMIPAIVGQFIAIFKDTSLAFVLGV
LELTFVAQGINNRLMIHPMEIYGTVAFLYFICCYSMSVFAARLERRLSPEKVSLRM
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory