Comparing 8502260 FitnessBrowser__Miya:8502260 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
7cagA Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state (see paper)
23% identity, 76% coverage: 65:293/301 of query aligns to 53:280/285 of 7cagA
>8502260 FitnessBrowser__Miya:8502260
MSAAPHAAPGPSAPLKSGPGMRLTLALFLTPVVLWLGLLIVLPHLDLLIMSFRMDPAFGD
DGWSLENYHQFFAEPIYWLTFVRTAGYSVLVTLLTFLVSLPVAFYVTKVVARNTSRFLLT
MLLLPFWVSELVRVYGWMILLRESGVLNHWLTALGITGAPVEMLYNDATMIMGLVYTSML
FMVVPLVSVLESLDDSLIEAACDLGAGPWTIMRTIVVPHCMPGIMSGAIVVFMLTLGNYL
TPNLMGGKNSLWFTEQIYNQFIASFNWNQGAAFGFLLLALSSCIIWLGLRLTGQKLSRVV
Q
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory