Comparing AO353_03415 AO353_03415 glucokinase to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
1sz2B Crystal structure of e. Coli glucokinase in complex with glucose (see paper)
39% identity, 99% coverage: 2:315/316 of query aligns to 2:314/320 of 1sz2B
6da0A Crystal structure of glucokinase (nfhk) from naegleria fowleri (see paper)
26% identity, 84% coverage: 8:272/316 of query aligns to 32:328/378 of 6da0A
>AO353_03415 AO353_03415 glucokinase
VKLALVGDIGGTNARFALWKDQQLESIQVLATADYACPEDAIGVYLSGLGLAPGSIGAVC
LSVAGPVSGDEFRFTNNHWRLSRKAFCQTLQVDRLLLVNDFSAMALGMTRLQPGEFRVVC
EGTPEPLRPAVVIGPGTGLGVGTLLDLGEGRWAALPGEGGHVDLPLSSPRETQLWQHIYN
EIGHVSAETALSGGGLPRVYRAICAVDGHEPVLDTPEAITAAGLAGDPIAVEVLEQFCCW
LGRVAGNNVLTVGGRGGVYIVGGVIPRFADFFLKSGFARCFADKGCMSEYFKGIPVWLVT
APYSGLTGAGVALEQA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory