Comparing AO353_08055 FitnessBrowser__pseudo3_N2E3:AO353_08055 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2vhaA Debp (see paper)
53% identity, 90% coverage: 24:294/300 of query aligns to 1:271/276 of 2vhaA
2ia4B Crystal structure of novel amino acid binding protein from shigella flexneri
53% identity, 90% coverage: 24:294/300 of query aligns to 2:272/278 of 2ia4B
8ovoA X-ray structure of the sf-iglusnfr-s72a in complex with l-aspartate
52% identity, 81% coverage: 29:272/300 of query aligns to 5:247/503 of 8ovoA
5eyfB Crystal structure of solute-binding protein from enterococcus faecium with bound glutamate
32% identity, 80% coverage: 30:268/300 of query aligns to 6:234/243 of 5eyfB
4zv2A An ancestral arginine-binding protein bound to glutamine (see paper)
32% identity, 73% coverage: 49:268/300 of query aligns to 16:223/225 of 4zv2A
Sites not aligning to the query:
4zv1A An ancestral arginine-binding protein bound to arginine (see paper)
32% identity, 73% coverage: 49:268/300 of query aligns to 16:225/226 of 4zv1A
Sites not aligning to the query:
5t0wA Crystal structure of the ancestral amino acid-binding protein anccdt- 1, a precursor of cyclohexadienyl dehydratase
31% identity, 80% coverage: 29:269/300 of query aligns to 2:229/229 of 5t0wA
6h20A Glnh bound to asn, mycobacterium tuberculosis (see paper)
25% identity, 85% coverage: 21:274/300 of query aligns to 35:281/287 of 6h20A
6h1uA Glnh bound to asp, mycobacterium tuberculosis (see paper)
25% identity, 85% coverage: 21:274/300 of query aligns to 35:281/287 of 6h1uA
6h2tA Glnh bound to glu, mycobacterium tuberculosis (see paper)
25% identity, 85% coverage: 21:274/300 of query aligns to 36:282/288 of 6h2tA
6svfA Crystal structure of the p235gk mutant of argbp from t. Maritima (see paper)
29% identity, 80% coverage: 30:270/300 of query aligns to 3:229/229 of 6svfA
2yjpA Crystal structure of the solute receptors for l-cysteine of neisseria gonorrhoeae (see paper)
27% identity, 79% coverage: 29:266/300 of query aligns to 3:229/247 of 2yjpA
4ohnA Crystal structure of an abc uptake transporter substrate binding protein from streptococcus pneumoniae with bound histidine
26% identity, 82% coverage: 29:275/300 of query aligns to 5:246/246 of 4ohnA
3vvfA Crystal structure of ttc0807 complexed with arginine (see paper)
28% identity, 82% coverage: 29:275/300 of query aligns to 9:241/241 of 3vvfA
3vveA Crystal structure of ttc0807 complexed with lysine (see paper)
28% identity, 82% coverage: 29:275/300 of query aligns to 9:241/241 of 3vveA
3vvdA Crystal structure of ttc0807 complexed with ornithine (see paper)
28% identity, 82% coverage: 29:275/300 of query aligns to 9:241/241 of 3vvdA
3vv5A Crystal structure of ttc0807 complexed with (s)-2-aminoethyl-l- cysteine (aec) (see paper)
28% identity, 82% coverage: 29:275/300 of query aligns to 5:237/237 of 3vv5A
4ymxA Crystal structure of the substrate binding protein of an amino acid abc transporter (see paper)
27% identity, 74% coverage: 49:270/300 of query aligns to 13:224/224 of 4ymxA
Sites not aligning to the query:
4z9nB Abc transporter / periplasmic binding protein from brucella ovis with glutathione bound
27% identity, 73% coverage: 29:247/300 of query aligns to 7:224/324 of 4z9nB
2v25A Structure of the campylobacter jejuni antigen peb1a, an aspartate and glutamate receptor with bound aspartate (see paper)
23% identity, 80% coverage: 28:267/300 of query aligns to 1:229/231 of 2v25A
>AO353_08055 FitnessBrowser__pseudo3_N2E3:AO353_08055
MQKITLIGCTLGLLLGTQVQAAEAPLTGTLSKIASANSITLGYRDASVPFSYVGDQSGQP
MGYSVDLANKIVERIQQKLALPQLKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTVERQK
QVAFSYGFIYVKGQLLTASDSGIKSFADLRGKSVVTTAGTTNERFLKSYNADHKIDMFVI
SAKDHGEAFQMLQSGRAAAFYMDDALLYGERAKARDPHKWVVVGEEQSREIYSCMVRKDD
PQFLALVNGALADLYSSGEINGIYQRWFEQPIPPKGLNLEFPMTSELKAIIAKPVSDPVE
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory