Comparing AO353_13350 AO353_13350 branched-chain amino acid ABC transporter permease to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found no hits to proteins with known functional sites (download)
>AO353_13350 AO353_13350 branched-chain amino acid ABC transporter permease
MSDTNNKPIDVKKSLIDTVLAGLIALIVFGPIVGVVLEGYSYNLQPTRVAWMVGAVMIGR
LALSLFMQTAKGEKVQQRFEIVGSGVHVLAPDFKSRLRFIIPALIVIAIVFPVFADKYLL
TVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYHYLGLGFWTVLPLSA
LMAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLILTNWLSFTGGPNGMPVPSPSFFGI
EFTRVAKDGGIPFHEFFGTEYNPNIKFMFIYAVLFLVVMLVLYIKHRLTRMPVGRAWEAL
REDEIACRAMGLNHVLVKLSAFTLGASTAGLAGVFFASYQGFVNPTSFTFFESALILAIV
VLGGMGSTVGVVIAAFVLTVAPELLRGFAEYRVLLFGILMVLMMIWKPRGLIRISRTGVT
PRKGALTERSAS
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory