SitesBLAST – Find functional sites

 

SitesBLAST

Comparing AO353_22195 FitnessBrowser__pseudo3_N2E3:AO353_22195 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

B5Z7I3 Ergothioneine transport permease/ergothioneine binding protein EgtU from Helicobacter pylori (strain G27) (see paper)
24% identity, 65% coverage: 19:164/223 of query aligns to 58:189/553 of B5Z7I3

query
sites
B5Z7I3
G
 
A
E
 
Q
T
 
H
L
 
F
Y
 
I
M
 
I
V
 
V
L
 
A
L
 
L
A
 
S
G
 
G
F
 
F
F
 
L
T
 
V
L
 
L
L
 
V
I
 
F
G
 
G
L
 
V
P
 
L
L
 
I
G
 
G
V
 
V
L
 
F
L
 
A
F
 
F
I
 
Y
S
 
N
R
 
S
S
 
K
G
 
A
G
 
R
L
 
A
Y
 
F
P
 
L
M
 
L
P
 
P
K
 
-
L
 
-
N
 
-
K
 
-
G
 
-
L
 
-
G
 
-
G
 
-
L
 
V
V
 
V
N
 
N
L
 
F
G
 
L
R
 
Y
S
 
T
L
 
I
P
 
P
F
 
S
V
 
L
V
 
A
M
 
L
L
 
F
I
 
A
A
 
L
L
 
F
I
 
I
P
 
P
L
 
-
T
 
-
R
 
-
L
 
-
I
 
V
V
 
I
G
 
G
T
 
V
T
 
G
L
 
L
G
 
K
S
 
N
T
 
A
-
 
L
-
 
L
-
 
V
-
 
L
-
 
V
-
 
L
A
 
Y
A
 
G
V
 
L
V
 
L
P
 
P
I
 
I
T
 
V
I
 
Y
G
 
S
A
 
T
F
 
Y
P
 
-
F
 
-
F
 
-
A
 
-
R
 
-
I
 
-
V
 
-
E
 
-
N
 
N
A
 
A
L
 
L
D
 
K
E
 
E
V
 
V
D
 
R
K
 
E
G
 
E
R
 
V
I
 
I
E
 
K
A
 
A
I
 
A
L
 
I
A
 
G
M
 
L
G
 
G
G
 
C
D
 
N
I
 
P
R
 
K
H
 
E
V
 
L
I
 
F
F
 
F
K
 
R
V
 
V
L
 
H
L
 
F
P
 
L
E
 
L
A
 
A
L
 
I
P
 
P
A
 
Q
L
 
I
L
 
L
A
 
A
G
 
G
I
 
L
T
 
R
L
 
I
T
 
A
L
 
V
V
 
V
M
 
M
L
 
L
I
 
V
G
 
A

Sites not aligning to the query:

Query Sequence

>AO353_22195 FitnessBrowser__pseudo3_N2E3:AO353_22195
MNRSIDWNEILQLVLNATGETLYMVLLAGFFTLLIGLPLGVLLFISRSGGLYPMPKLNKG
LGGLVNLGRSLPFVVMLIALIPLTRLIVGTTLGSTAAVVPITIGAFPFFARIVENALDEV
DKGRIEAILAMGGDIRHVIFKVLLPEALPALLAGITLTLVMLIGFSSMAGVIGGGGLGDL
AIRYGYQRFNNQVMVATVVVLVILVQGVQSLGDRLVRSLAHRR

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory