SitesBLAST
Comparing AO353_23060 FitnessBrowser__pseudo3_N2E3:AO353_23060 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
O06644 Formyl-CoA:oxalate CoA-transferase; FCOCT; Formyl-coenzyme A transferase; EC 2.8.3.16 from Oxalobacter formigenes (see 4 papers)
31% identity, 94% coverage: 4:398/418 of query aligns to 5:428/428 of O06644
- Q17 (≠ L16) mutation to A: 45-fold decrease of the catalytic effiency.
- R38 (≠ P37) binding
- W48 (= W47) mutation to F: Little change in the affinity binding and catalytic efficiency, and it does not display major structural changes.; mutation to P: Little change in the affinity binding and catalytic efficiency. It exhibits substrate inhibition with oxalate. It does not display major structural changes.
- R104 (≠ S102) binding
- D169 (= D167) active site, Nucleophile; mutation to A: Loss of CoA-transferase activity.; mutation to E: Loss of CoA-transferase activity.; mutation to S: Loss of CoA-transferase activity.
- G259 (vs. gap) mutation to A: 2.5-fold decrease of the catalytic effiency.
- G260 (vs. gap) mutation to A: 25-fold decrease of the catalytic effiency. Reduction of the affinity binding for both formyl-CoA and oxalate.
1p5rA Formyl-coa transferase in complex with coenzyme a (see paper)
31% identity, 94% coverage: 4:398/418 of query aligns to 4:427/427 of 1p5rA
- active site: Q16 (≠ L16), E139 (≠ D138), D168 (= D167), G259 (vs. gap), G260 (vs. gap)
- binding coenzyme a: H14 (≠ R14), V15 (≠ A15), Q16 (≠ L16), A17 (≠ S17), R37 (≠ P37), M73 (≠ F72), K74 (≠ R73), N95 (= N94), F96 (= F95), A100 (≠ T99), R103 (≠ S102), K136 (≠ P135), V137 (≠ G136), D168 (= D167), M199 (≠ L198)
2vjoA Formyl-coa transferase mutant variant q17a with aspartyl-coa thioester intermediates and oxalate (see paper)
31% identity, 94% coverage: 4:398/418 of query aligns to 4:427/427 of 2vjoA
- active site: A16 (≠ L16), E139 (≠ D138), D168 (= D167), G259 (vs. gap), G260 (vs. gap)
- binding coenzyme a: H14 (≠ R14), A16 (≠ L16), A17 (≠ S17), R37 (≠ P37), L71 (≠ I70), M73 (≠ F72), N95 (= N94), F96 (= F95), G97 (≠ K96), R103 (≠ S102), M104 (= M103), K136 (≠ P135), V137 (≠ G136), Y138 (≠ F137), D168 (= D167), M199 (≠ L198)
- binding oxalate ion: G257 (vs. gap), G259 (vs. gap), Q261 (vs. gap)
2vjkA Formyl-coa transferase with aspartyl-coa thioester intermediate derived from oxalyl-coa (see paper)
31% identity, 94% coverage: 4:398/418 of query aligns to 4:427/427 of 2vjkA
- active site: Q16 (≠ L16), E139 (≠ D138), D168 (= D167), G259 (vs. gap), G260 (vs. gap)
- binding coenzyme a: H14 (≠ R14), Q16 (≠ L16), A17 (≠ S17), R37 (≠ P37), M73 (≠ F72), K74 (≠ R73), N95 (= N94), F96 (= F95), G97 (≠ K96), R103 (≠ S102), M104 (= M103), K136 (≠ P135), V137 (≠ G136), Y138 (≠ F137), D168 (= D167), M199 (≠ L198)
- binding magnesium ion: D293 (≠ T258), D296 (= D261)
1t4cA Formyl-coa transferase in complex with oxalyl-coa (see paper)
31% identity, 94% coverage: 4:398/418 of query aligns to 4:427/427 of 1t4cA
- active site: Q16 (≠ L16), E139 (≠ D138), D168 (= D167), G259 (vs. gap), G260 (vs. gap)
- binding coenzyme a: H14 (≠ R14), V15 (≠ A15), Q16 (≠ L16), R37 (≠ P37), M73 (≠ F72), N95 (= N94), F96 (= F95), R103 (≠ S102), M104 (= M103), V137 (≠ G136), Y138 (≠ F137), D168 (= D167), M199 (≠ L198)
- binding oxalic acid: G259 (vs. gap), G260 (vs. gap)
1t3zA Formyl-coa tranferase mutant asp169 to ser (see paper)
31% identity, 94% coverage: 4:398/418 of query aligns to 4:427/427 of 1t3zA
- active site: Q16 (≠ L16), E139 (≠ D138), S168 (≠ D167), G259 (vs. gap), G260 (vs. gap)
- binding oxidized coenzyme a: H14 (≠ R14), V15 (≠ A15), A17 (≠ S17), R37 (≠ P37), K74 (≠ R73), N95 (= N94), F96 (= F95), A100 (≠ T99), R103 (≠ S102), M104 (= M103), K136 (≠ P135), V137 (≠ G136), Y138 (≠ F137), E139 (≠ D138), M199 (≠ L198)
1pt5A Crystal structure of gene yfdw of e. Coli (see paper)
32% identity, 94% coverage: 4:398/418 of query aligns to 4:415/415 of 1pt5A
- active site: Q16 (≠ L16), E139 (≠ D138), D168 (= D167), G247 (≠ S228), G248 (≠ V229)
- binding acetyl coenzyme *a: V15 (≠ A15), S17 (= S17), R37 (≠ P37), L71 (≠ I70), N72 (≠ D71), T73 (≠ F72), K74 (≠ R73), N95 (= N94), F96 (= F95), H97 (≠ K96), K124 (≠ N123), K136 (≠ P135), A137 (≠ G136), Y138 (≠ F137), E139 (≠ D138), D168 (= D167), M199 (≠ L198)
P69902 Formyl-CoA:oxalate CoA-transferase; FCOCT; Formyl-coenzyme A transferase; Formyl-CoA transferase; EC 2.8.3.16 from Escherichia coli (strain K12) (see paper)
32% identity, 94% coverage: 4:398/418 of query aligns to 5:416/416 of P69902
1q6yA Hypothetical protein yfdw from e. Coli bound to coenzyme a (see paper)
32% identity, 94% coverage: 4:398/418 of query aligns to 5:416/417 of 1q6yA
- active site: Q17 (≠ L16), E140 (≠ D138), D169 (= D167), G248 (≠ S228), G249 (≠ V229)
- binding coenzyme a: V16 (≠ A15), Q17 (≠ L16), S18 (= S17), R38 (≠ P37), L72 (≠ I70), N73 (≠ D71), T74 (≠ F72), K75 (≠ R73), N96 (= N94), F97 (= F95), H98 (≠ K96), M105 (= M103), I124 (= I122), K137 (≠ P135), A138 (≠ G136), Y139 (≠ F137), D169 (= D167), M200 (≠ L198)
3ubmB Formyl-coa:oxalate coa-transferase from acetobacter aceti (see paper)
29% identity, 94% coverage: 4:396/418 of query aligns to 5:426/430 of 3ubmB
- active site: Q17 (≠ L16), E140 (≠ D138), D182 (= D167), G261 (≠ S228), G262 (≠ V229)
- binding coenzyme a: V16 (≠ A15), R38 (≠ P37), L72 (≠ I70), N73 (≠ D71), T74 (≠ F72), K75 (≠ R73), N96 (= N94), F97 (= F95), R98 (≠ K96), A101 (≠ T99), R104 (≠ S102), K125 (≠ N123), D182 (= D167), M213 (≠ L198)
5yx6A Crystal structure of rv3272 from m. Tuberculosis orthorhombic form (see paper)
33% identity, 89% coverage: 4:375/418 of query aligns to 6:356/360 of 5yx6A