Comparing AO353_23650 AO353_23650 3-carboxymuconate cyclase to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
P52697 6-phosphogluconolactonase; 6-P-gluconolactonase; Pgl; EC 3.1.1.31 from Escherichia coli (strain K12) (see paper)
26% identity, 77% coverage: 71:370/391 of query aligns to 41:311/331 of P52697
1jofB Neurospora crassa 3-carboxy-cis,cis-mucoante lactonizing enzyme (see paper)
23% identity, 72% coverage: 29:311/391 of query aligns to 4:280/365 of 1jofB
Sites not aligning to the query:
5c2vB Kuenenia stuttgartiensis hydrazine synthase (see paper)
24% identity, 59% coverage: 122:353/391 of query aligns to 15:209/352 of 5c2vB
>AO353_23650 AO353_23650 3-carboxymuconate cyclase
MKMRKLWPLLMAGSVGAMGLSSASAESFQLLVGTYTQGQSQGIYRLKFDSQSGQLDATPL
QVVKSANPSWLTLSSDQRRLFVVNENGPGQADPVGRVSSFAVEPNTHALSLINQVQSLGN
EPTHSSLSADGKYLFVSNYSVAEDPGGNLAALPVSTDGKLAPPVQLSSHQPSRVNPERQM
SAHVHSTVSSPDGQYVFANDLGADKVFVYRYDPKANPERPLTAATPASVQLPPGSGPRHL
LFSADGKHAYLTLEMSAQVAVFDYQAGKLTQRQMVDLAAGKPAAQKAAAALHASSDGKFL
YVSNRGTTNELLVFAIDPASGELKELQRRPVEGDHPREFSLDPSGKFVLVANQKSNQIVI
IARDVKTGLLGKTVQKLPFDSPSDIKFFLRQ
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory