Comparing AO356_01645 FitnessBrowser__pseudo5_N2C3_1:AO356_01645 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
7cagA Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state (see paper)
26% identity, 91% coverage: 5:267/289 of query aligns to 2:266/285 of 7cagA
>AO356_01645 FitnessBrowser__pseudo5_N2C3_1:AO356_01645
MKLIDAMRRGRQGYLMSAPALALYLGLLVIPLGLTLVLSFNVFDYSSGIDGDAYTFEHYT
SLLGDPYFYEIFLRTFWISALTTVLCVLIGVPEAYILSRMGAPWRSIFLILILTPLLISV
VVRAFGWSLLLGADGLINQALQALGSAPMKLLYTPFAVVIALVHVMLPFMIIPVWTSLQK
LDPAAEQAALSLGASQFTVIRKIVLPQIMPGVLSGTLIVFGLAASSFAIPGLLGGRRLKM
VATLIYDQYLSELNWPMGAAIAVALLLLNLLIMLSWNRMIEGRYKKSLG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory