Comparing AO356_05280 FitnessBrowser__pseudo5_N2C3_1:AO356_05280 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
8crvA Crystal structure of the carbamate kinase from pseudomonas aeruginosa
82% identity, 100% coverage: 1:309/309 of query aligns to 3:312/312 of 8crvA
1e19A Structure of the carbamate kinase-like carbamoyl phosphate synthetase from the hyperthermophilic archaeon pyrococcus furiosus bound to adp (see paper)
46% identity, 96% coverage: 2:299/309 of query aligns to 3:311/313 of 1e19A
4jz8A Carbamate kinase from giardia lamblia bound to citric acid (see paper)
44% identity, 96% coverage: 3:299/309 of query aligns to 7:313/316 of 4jz8A
4jz7C Carbamate kinase from giardia lamblia bound to amp-pnp (see paper)
44% identity, 96% coverage: 3:299/309 of query aligns to 7:313/316 of 4jz7C
4olcA Carbamate kinase from giardia lamblia thiocarbamoylated by disulfiram on cys242 (see paper)
44% identity, 96% coverage: 3:299/309 of query aligns to 6:305/308 of 4olcA
4jz7A Carbamate kinase from giardia lamblia bound to amp-pnp (see paper)
42% identity, 96% coverage: 3:299/309 of query aligns to 7:282/285 of 4jz7A
3kzfB Structure of giardia carbamate kinase (see paper)
43% identity, 96% coverage: 3:299/309 of query aligns to 6:295/298 of 3kzfB
3kzfD Structure of giardia carbamate kinase (see paper)
42% identity, 96% coverage: 3:299/309 of query aligns to 6:290/293 of 3kzfD
P0A2X8 Carbamate kinase 1; EC 2.7.2.2 from Enterococcus faecium (Streptococcus faecium) (see 2 papers)
41% identity, 94% coverage: 2:290/309 of query aligns to 4:298/310 of P0A2X8
Sites not aligning to the query:
2we5A Carbamate kinase from enterococcus faecalis bound to mgadp (see paper)
41% identity, 94% coverage: 2:290/309 of query aligns to 3:297/309 of 2we5A
2we4A Carbamate kinase from enterococcus faecalis bound to a sulfate ion and two water molecules, which mimic the substrate carbamyl phosphate (see paper)
41% identity, 94% coverage: 2:290/309 of query aligns to 3:297/309 of 2we4A
4axsA Structure of carbamate kinase from mycoplasma penetrans (see paper)
36% identity, 96% coverage: 2:299/309 of query aligns to 1:289/291 of 4axsA
>AO356_05280 FitnessBrowser__pseudo5_N2C3_1:AO356_05280
MRIVVALGGNALLRRGEPLTAANQRSNIRTATEQIAKIHPGNQLVIAHGNGPQVGLLSLQ
AAAYTAVTPYPLDVLGAETEGMIGYIIEQELGNLLDFEVPFATLLTQVEVDGNDPAFQNP
TKPIGPVYSKADAERLAAEKDWTIAPDGDKFRRVVASPRPKRIFEIRPIKWLLEKGSIVI
CAGGGGIPTMYDADGKLQGVEAVIDKDLCSALLAEQLESDLLVIATDVNAAFIDFGKPTQ
KAIAQAHPDEMEKLGFAAGSMGPKVQAACEFARNTGKVAVIGSLSDIDAIVQGQAGTRIS
TATAGITYR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory