Comparing AO356_05335 FitnessBrowser__pseudo5_N2C3_1:AO356_05335 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
33% identity, 99% coverage: 2:254/255 of query aligns to 1:254/254 of 1g6hA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
33% identity, 99% coverage: 2:253/255 of query aligns to 1:253/253 of 1g9xB
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
31% identity, 100% coverage: 1:255/255 of query aligns to 2:240/240 of 1ji0A
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
30% identity, 98% coverage: 5:254/255 of query aligns to 2:236/240 of 6mjpA
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
33% identity, 94% coverage: 4:242/255 of query aligns to 3:224/285 of 4yerA
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
31% identity, 92% coverage: 8:241/255 of query aligns to 4:223/240 of 4ymuJ
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
31% identity, 98% coverage: 6:254/255 of query aligns to 3:236/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
31% identity, 98% coverage: 6:254/255 of query aligns to 3:236/238 of 6s8gA
6mbnA Lptb e163q in complex with atp (see paper)
31% identity, 98% coverage: 6:254/255 of query aligns to 4:237/241 of 6mbnA
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
31% identity, 97% coverage: 6:253/255 of query aligns to 3:235/235 of 6mhzA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
30% identity, 97% coverage: 6:252/255 of query aligns to 3:234/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
30% identity, 97% coverage: 6:252/255 of query aligns to 3:234/234 of 4p31A
7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation (see paper)
31% identity, 95% coverage: 2:242/255 of query aligns to 1:229/263 of 7d0aB
7d08B Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
31% identity, 95% coverage: 2:242/255 of query aligns to 1:229/263 of 7d08B
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
32% identity, 94% coverage: 15:254/255 of query aligns to 27:250/378 of P69874
Sites not aligning to the query:
6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp (see paper)
31% identity, 93% coverage: 5:242/255 of query aligns to 2:227/253 of 6z5uK
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
30% identity, 96% coverage: 6:251/255 of query aligns to 3:233/233 of 6b8bA
8y5iA Cryo-em structure of e.Coli spermidine transporter potd-potabc in translocation intermidiate state (see paper)
32% identity, 94% coverage: 15:254/255 of query aligns to 12:235/358 of 8y5iA
3c4jA Abc protein artp in complex with atp-gamma-s
30% identity, 98% coverage: 4:254/255 of query aligns to 2:240/242 of 3c4jA