Comparing AO356_05660 FitnessBrowser__pseudo5_N2C3_1:AO356_05660 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 6 hits to proteins with known functional sites (download)
Q5ZC82 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; Protein LONELY GUY; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice) (see paper)
31% identity, 48% coverage: 85:261/372 of query aligns to 36:216/242 of Q5ZC82
7w2iA Crystal structure of log (rv1205) from mycobacterium tuberculosis (see paper)
27% identity, 48% coverage: 80:259/372 of query aligns to 2:177/183 of 7w2iA
O05306 Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Protein LONELY GUY homolog; LOG homolog; EC 3.2.2.n1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
27% identity, 48% coverage: 80:259/372 of query aligns to 6:181/187 of O05306
P48636 Cytokinin riboside 5'-monophosphate phosphoribohydrolase; AMP nucleosidase; PaLOG; EC 3.2.2.n1; EC 3.2.2.4 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
31% identity, 42% coverage: 85:241/372 of query aligns to 4:157/195 of P48636
6gfmA Crystal structure of the escherichia coli nucleosidase ppnn (pppgpp- form) (see paper)
26% identity, 47% coverage: 102:274/372 of query aligns to 166:353/440 of 6gfmA
5zbkA Crystal structure of type-i log from pseudomonas aeruginosa pao1 in complex with amp (see paper)
31% identity, 42% coverage: 85:241/372 of query aligns to 3:156/182 of 5zbkA
>AO356_05660 FitnessBrowser__pseudo5_N2C3_1:AO356_05660
MPYKPNDLLSRHFENHGHDLTRKVEEQLNLVSPNSPNLPIYRDMILTVLRMAQEDHNRWN
AKITLQTLRELEHAFRTLEQFKGRRKVTVFGSARTPIEHPLYGLARELGASLARSDMMVI
TGAGGGIMAAAHEGAGRDHSLGFNITLPFEQHANPTVEGTSNLLPFHFFFTRKLFFVKEA
DALVLCPGGFGTLDEALEVLTLVQTGKSPLVPVVLLDVPGGRFWQSALDFIREQLEENRY
ILPTDMKLMRLVYNAEEAVEEINQFYRNFHSSRWLKHQFVIRMNHKLSEQALQQMQVDFA
DLCLNDCFHQHDYSGEEHDEARFSHLTRLTFTFNARNHGRLRELVDYINLPENWAQPTPQ
THPLTWEPIKVT
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory