SitesBLAST – Find functional sites

 

SitesBLAST

Comparing AO356_07045 FitnessBrowser__pseudo5_N2C3_1:AO356_07045 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

O31645 PTS system mannose-specific EIIBCA component; EIIBCA-Man; EII-Man; EC 2.7.1.191 from Bacillus subtilis (strain 168) (see 2 papers)
26% identity, 94% coverage: 3:147/154 of query aligns to 501:646/650 of O31645

query
sites
O31645
R
 
K
L
 
L
E
 
T
K
 
D
I
 
I
L
 
I
T
 
S
P
 
P
G
 
E
R
 
L
S
 
I
L
 
E
V
 
P
N
 
N
A
 
L
P
 
S
G
 
G
G
 
E
S
 
T
K
 
S
K
 
D
K
 
D
A
 
I
L
 
I
E
 
D
Q
 
E
T
 
L
A
 
I
N
 
Q
L
 
K
I
 
L
H
 
S
R
 
R
E
 
R
V
 
G
P
 
A
D
 
L
L
 
L
G
 
S
M
 
E
Q
 
S
D
 
G
V
 
F
F
 
K
E
 
Q
A
 
A
L
 
I
V
 
L
A
 
N
R
 
R
E
 
E
K
 
Q
L
 
Q
G
 
G
S
 
T
T
 
T
G
 
A
F
 
I
G
 
G
N
 
M
G
 
N
I
 
I
A
 
A
I
 
I
P
 
P
H
 
H
C
 
G
R
 
K
L
 
S
K
 
E
G
 
A
C
 
V
T
 
R
A
 
E
P
 
P
I
 
S
S
 
V
A
 
A
L
 
F
L
 
G
H
 
I
L
 
K
E
 
R
A
 
S
P
 
G
I
 
V
D
 
D
F
 
W
D
 
N
A
 
S
I
 
L
D
 
D
G
 
G
A
 
S
P
 
E
V
 
A
D
 
K
L
 
L
L
 
I
F
 
F
V
 
M
L
 
I
L
 
A
V
 
V
P
 
P
-
 
K
E
 
E
A
 
S
A
 
G
T
 
G
D
 
N
A
 
Q
H
 
H
L
 
L
E
 
K
L
 
I
L
 
L
R
 
Q
Q
 
M
I
 
L
A
 
S
S
 
R
M
 
K
L
 
L
D
 
M
R
 
D
K
 
D
E
 
N
V
 
Y
R
 
R
E
 
E
K
 
R
L
 
L
R
 
L
S
 
S
A
 
V
P
 
Q
S
 
T
N
 
T
E
 
E
A
 
E
L
 
A
Y
 
Y
Q
 
K
V
 
L
V
 
L

Sites not aligning to the query:

Query Sequence

>AO356_07045 FitnessBrowser__pseudo5_N2C3_1:AO356_07045
MIRLEKILTPGRSLVNAPGGSKKKALEQTANLIHREVPDLGMQDVFEALVAREKLGSTGF
GNGIAIPHCRLKGCTAPISALLHLEAPIDFDAIDGAPVDLLFVLLVPEAATDAHLELLRQ
IASMLDRKEVREKLRSAPSNEALYQVVLDEQNGH

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory