Comparing AO356_21075 FitnessBrowser__pseudo5_N2C3_1:AO356_21075 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
Q978S7 Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) (see paper)
34% identity, 98% coverage: 6:598/607 of query aligns to 25:614/623 of Q978S7
Q4J7W0 Trehalase 1; Alpha,alpha-trehalase; SaTreH1; EC 3.2.1.28 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see paper)
33% identity, 95% coverage: 15:590/607 of query aligns to 8:549/558 of Q4J7W0
D2PPM8 Isomaltose glucohydrolase; EC 3.2.1.205 from Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) (see paper)
27% identity, 41% coverage: 266:513/607 of query aligns to 48:288/385 of D2PPM8
Sites not aligning to the query:
5z3fA Glycosidase e335a in complex with glucose (see paper)
27% identity, 41% coverage: 266:513/607 of query aligns to 40:280/371 of 5z3fA
Sites not aligning to the query:
7c24A Glycosidase f290y at ph8.0 (see paper)
27% identity, 41% coverage: 266:513/607 of query aligns to 40:280/372 of 7c24A
>AO356_21075 FitnessBrowser__pseudo5_N2C3_1:AO356_21075
MADHDEPQSPIENHGIIGDMRTAALVNDRGSVDFFCWPEFDSPSIFCSLLDTAQAGIFQL
APDLPDARRQQIYLPDTNVLQTRWLSDGAVVELTDLLPIGDSEDDLPVLIRRVRMTIGSA
TFRLRCAVRHDYARAATTARQDGAHICFEAPGQPSLRLCADQPLTLDGNAAVAEFTLTQG
QSAEFLLGGIDDPRLQDDVSAICLERTLAFWRGWIGQSNYRGRWREMVNRSALALKLLTS
RKHGAILAAATFGLPETRGGERNWDYRYTWIRDASFTVYAFMRLGFVEEANAYMRWLRGR
VSDCCDQPTKLNILYGLDGRLELPETELPHLSGFGNAQPVRIGNLAYQQVQLDIFGELMD
AVYLVNKYGEAISHEGWKHTVDVVDQVCEVWQDKDVGIWEMRGDKQHFLHSRLMCWVAVD
RAIRLAEKRSLPAPFARWDETRQAIYQDIWTNFWNDEHQHFIQRLGSTALDGSMLLMPLV
RFVSARDPRWLSTLDAIEKHLVRDGMVYRYRNDDSPIDGLSGIEGSFAACSFWYVECLAR
AGRVEKAQLEFEQLLRYANPLGLYAEEFDSHGYHLGNTPQALTHLALISAASFLDRKLSG
EKNHWQP
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory