SitesBLAST – Find functional sites

 

SitesBLAST

Comparing AO356_25665 FitnessBrowser__pseudo5_N2C3_1:AO356_25665 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

H1ZZB0 Aurachin B dehydrogenase; EC 1.1.1.394 from Stigmatella aurantiaca (see paper)
28% identity, 74% coverage: 1:212/288 of query aligns to 1:224/334 of H1ZZB0

query
sites
H1ZZB0
M
 
M
H
 
R
V
 
T
F
 
F
V
 
V
T
 
T
G
 
G
A
 
G
T
 
S
G
 
G
W
 
Y
V
 
L
G
 
G
A
 
R
S
 
N
V
 
L
V
 
L
Q
 
S
D
 
A
L
 
L
I
 
V
A
 
A
A
 
R
G
 
G
H
 
I
R
 
S
V
 
V
T
 
R
G
 
A
L
 
L
A
 
V
R
 
R
C
 
S
E
 
E
E
 
E
K
 
A
G
 
A
A
 
Q
T
 
K
L
 
V
A
 
Q
A
 
A
T
 
L
G
 
G
A
 
A
K
 
Q
V
 
P
I
 
I
P
 
L
G
 
G
T
 
T
L
 
L
D
 
E
D
 
H
L
 
R
E
 
E
I
 
T
L
 
L
H
 
K
S
 
E
A
 
G
A
 
M
S
 
A
A
 
G
A
 
C
D
 
D
A
 
V
V
 
L
I
 
F
H
 
H
-
 
A
T
 
A
A
 
A
F
 
L
N
 
T
H
 
S
D
 
A
F
 
R
S
 
A
R
 
T
F
 
D
A
 
A
E
 
E
N
 
F
A
 
H
Q
 
R
Q
 
A
D
 
N
R
 
V
R
 
L
A
 
G
I
 
T
E
 
E
T
 
T
L
 
V
G
 
L
D
 
A
A
 
A
L
 
A
R
 
R
G
 
D
S
 
A
D
 
R
R
 
I
P
 
Q
L
 
R
L
 
M
V
 
V
-
 
H
-
 
V
-
x
S
T
 
T
S
 
E
G
 
A
L
 
V
F
 
L
G
 
A
L
 
D
T
 
G
R
 
R
G
 
P
A
 
L
S
 
L
E
 
Q
L
 
V
E
 
D
V
 
E
V
 
S
S
 
H
P
 
P
A
 
L
S
 
P
P
 
K
R
 
R
-
 
P
-
 
F
-
 
A
-
 
G
-
x
Y
-
 
P
-
 
A
-
 
T
K
 
K
S
 
A
E
 
Q
A
 
A
A
 
E
A
 
Q
R
 
L
D
 
V
L
 
L
A
 
Q
E
 
A
R
 
N
G
 
G
G
 
P
R
 
G
V
 
F
A
 
T
T
 
T
V
 
V
R
 
V
L
 
V
A
 
R
P
 
P
S
 
R
-
 
F
V
 
I
H
 
W
G
 
G
L
 
A
G
 
D
D
 
D
H
 
T
G
 
A
F
 
F
V
 
L
P
 
P
I
 
Q
L
 
L
I
 
I
R
 
D
L
 
A
A
 
I
R
 
R
Q
 
T
S
 
K
G
 
R
V
 
F
S
 
R
A
 
W
Y
 
V
P
 
D
G
 
G
D
 
-
G
 
G
S
 
R
H
 
Y
C
 
L
W
 
T
S
 
S
G
 
T
V
 
C
H
 
H
R
 
V
Q
 
A
D
 
N
A
 
V
A
 
C
R
 
E
V
 
G
Y
 
M
R
 
L
L
 
L
A
 
A
L
 
A
E
 
E
Q
 
R
G
 
G
V
 
P
T
 
G
Q
 
G
S
 
E
V
 
V
Y
 
Y

Query Sequence

>AO356_25665 FitnessBrowser__pseudo5_N2C3_1:AO356_25665
MHVFVTGATGWVGASVVQDLIAAGHRVTGLARCEEKGATLAATGAKVIPGTLDDLEILHS
AASAADAVIHTAFNHDFSRFAENAQQDRRAIETLGDALRGSDRPLLVTSGLFGLTRGASE
LEVVSPASPRKSEAAARDLAERGGRVATVRLAPSVHGLGDHGFVPILIRLARQSGVSAYP
GDGSHCWSGVHRQDAARVYRLALEQGVTQSVYHAVADEAVPFKDIAQAIGRGLGLPVESR
EREHFGWFAHMAGANMAVSSEYTRALLGWTPSGPGLLDDLEHPGYYAG

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory