Comparing AO356_29900 FitnessBrowser__pseudo5_N2C3_1:AO356_29900 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7svqA Crystal structure of l-galactose dehydrogenase from spinacia oleracea in complex with NAD+ (see paper)
30% identity, 75% coverage: 74:367/394 of query aligns to 18:281/315 of 7svqA
7eziA Rice l-galactose dehydrogenase (apo form)
30% identity, 75% coverage: 74:367/394 of query aligns to 24:287/323 of 7eziA
7ezlA Rice l-galactose dehydrogenase (holo form)
30% identity, 75% coverage: 74:367/394 of query aligns to 19:282/318 of 7ezlA
P46336 Aldo-keto reductase IolS; AKR11A; Vegetative protein 147; VEG147; EC 1.1.1.- from Bacillus subtilis (strain 168) (see paper)
25% identity, 76% coverage: 74:372/394 of query aligns to 17:297/310 of P46336
1pz0A Structure of NADPH-dependent family 11 aldo-keto reductase akr11a(holo) (see paper)
25% identity, 76% coverage: 74:372/394 of query aligns to 16:296/311 of 1pz0A
1ynqB Aldo-keto reductase akr11c1 from bacillus halodurans (holo form) (see paper)
27% identity, 77% coverage: 67:369/394 of query aligns to 1:272/298 of 1ynqB
1ynpB Aldo-keto reductase akr11c1 from bacillus halodurans (apo form) (see paper)
27% identity, 77% coverage: 67:369/394 of query aligns to 1:272/298 of 1ynpB
1ynpA Aldo-keto reductase akr11c1 from bacillus halodurans (apo form) (see paper)
26% identity, 77% coverage: 67:369/394 of query aligns to 1:257/283 of 1ynpA
Sites not aligning to the query:
P77256 NADH-specific methylglyoxal reductase; AKR11B2; EC 1.1.1.- from Escherichia coli (strain K12) (see paper)
26% identity, 78% coverage: 68:375/394 of query aligns to 11:312/326 of P77256
3v0sA Crystal structure of perakine reductase, founder member of a novel akr subfamily with unique conformational changes during NADPH binding (see paper)
27% identity, 74% coverage: 89:380/394 of query aligns to 26:273/287 of 3v0sA
Q3L181 Perakine reductase; EC 1.1.1.317 from Rauvolfia serpentina (Serpentine wood) (Ophioxylon serpentinum) (see paper)
27% identity, 78% coverage: 73:380/394 of query aligns to 18:305/337 of Q3L181
4exaF Crystal structure of the pa4992, the putative aldo-keto reductase from pseudomona aeruginosa (see paper)
31% identity, 41% coverage: 89:250/394 of query aligns to 48:177/259 of 4exaF
Sites not aligning to the query:
8hw0A The structure of akr6d1
25% identity, 70% coverage: 92:368/394 of query aligns to 33:301/329 of 8hw0A
Sites not aligning to the query:
Q14722 Voltage-gated potassium channel subunit beta-1; K(+) channel subunit beta-1; Kv-beta-1; EC 1.1.1.- from Homo sapiens (Human) (see paper)
24% identity, 72% coverage: 87:370/394 of query aligns to 116:391/419 of Q14722
P63144 Voltage-gated potassium channel subunit beta-1; K(+) channel subunit beta-1; Kv-beta-1; EC 1.1.1.- from Rattus norvegicus (Rat) (see paper)
24% identity, 72% coverage: 87:370/394 of query aligns to 98:373/401 of P63144
Q13303 Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2; EC 1.1.1.- from Homo sapiens (Human) (see 2 papers)
23% identity, 72% coverage: 87:370/394 of query aligns to 64:339/367 of Q13303
Sites not aligning to the query:
7wf3C Composite map of human kv1.3 channel in apo state with beta subunits (see paper)
23% identity, 72% coverage: 87:370/394 of query aligns to 31:306/328 of 7wf3C
Sites not aligning to the query:
P62483 Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; EC 1.1.1.- from Rattus norvegicus (Rat) (see 11 papers)
23% identity, 72% coverage: 87:370/394 of query aligns to 64:339/367 of P62483
Sites not aligning to the query:
P62482 Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; Neuroimmune protein F5; EC 1.1.1.- from Mus musculus (Mouse) (see 2 papers)
23% identity, 72% coverage: 87:370/394 of query aligns to 64:339/367 of P62482
Sites not aligning to the query:
3eauA Voltage-dependent k+ channel beta subunit in complex with cortisone (see paper)
23% identity, 72% coverage: 87:370/394 of query aligns to 30:305/327 of 3eauA
Sites not aligning to the query:
>AO356_29900 FitnessBrowser__pseudo5_N2C3_1:AO356_29900
MDRRDFLTYSAVGTVAAALLPASGVASSLAPAAVPSSLTEPGSVMRTEGRIVRADLPVNL
PSHAMRYMTPQRFGMGGTQIGNIFAPISDEQASAVLQAAWEAGVRLYDTSPFYGFGLSEY
RLGRFLRGKNPDDYVVSTKVGRVLTAAGGRRADHAIWKSPAPFNYRYDYTAAGARRSVED
SLQRLGLPRIDIVFIHDISPDNTELEGGWEAAYRIARSGAMVELEKMRDEGFIKAWGFGV
NTPNAVVQAVAGYDPTPDIVLLACQYSLLDHGEALRNTFPALSSKGTSAVVGTPLNDGFL
GGRSRYNFSPDLPAGAVEKRARIMAVARKHGIDIHTAALQFAAAHPQVSAIIPGARSPGQ
IVSNVQAMKVGIPAAFWEELKSQGLIDAQAPVPS
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory