SitesBLAST
Comparing AO356_30130 FitnessBrowser__pseudo5_N2C3_1:AO356_30130 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3lxdA Crystal structure of ferredoxin reductase arr from novosphingobium aromaticivorans (see paper)
38% identity, 99% coverage: 3:408/410 of query aligns to 4:408/409 of 3lxdA
- active site: H13 (= H12), R44 (= R43), P45 (= P44), N302 (≠ E298)
- binding flavin-adenine dinucleotide: V9 (= V8), G10 (= G9), G12 (= G11), H13 (= H12), G14 (≠ A13), R36 (≠ D35), E37 (= E36), R44 (= R43), P45 (= P44), S48 (= S47), K49 (= K48), E81 (≠ P80), V82 (= V81), T109 (= T108), I157 (= I155), G278 (= G275), D279 (= D276), S297 (≠ T293), V298 (≠ W294), F325 (= F321), W326 (= W322)
P16640 Putidaredoxin reductase CamA; Pdr; Putidaredoxin--NAD(+) reductase; EC 1.18.1.5 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
37% identity, 99% coverage: 2:408/410 of query aligns to 4:412/422 of P16640
- A15 (= A13) binding
- D37 (= D35) binding
- K50 (= K48) binding
- V83 (= V81) binding
- R134 (= R129) binding
- D284 (= D276) binding
- V302 (≠ W294) binding
3fg2P Crystal structure of ferredoxin reductase for the cyp199a2 system from rhodopseudomonas palustris (see paper)
42% identity, 82% coverage: 2:337/410 of query aligns to 1:336/404 of 3fg2P
- binding flavin-adenine dinucleotide: G8 (= G9), G10 (= G11), H11 (= H12), A12 (= A13), D34 (= D35), E35 (= E36), R42 (= R43), P43 (= P44), S46 (= S47), K47 (= K48), R78 (≠ P80), M79 (≠ V81), T106 (= T108), R127 (= R129), I153 (= I155), D275 (= D276), S292 (≠ T293), V293 (≠ W294), W321 (= W322)
1q1wA Crystal structure of putidaredoxin reductase from pseudomonas putida (see paper)
37% identity, 99% coverage: 2:408/410 of query aligns to 3:411/422 of 1q1wA
- active site: L13 (≠ H12), L44 (≠ R43), P45 (= P44), L305 (≠ E298)
- binding flavin-adenine dinucleotide: G10 (= G9), G12 (= G11), L13 (≠ H12), A14 (= A13), G35 (= G34), D36 (= D35), L44 (≠ R43), P45 (= P44), K49 (= K48), V82 (= V81), A108 (= A107), T109 (= T108), G110 (= G109), R133 (= R129), I159 (= I155), D283 (= D276), S300 (≠ T293), V301 (≠ W294), W329 (= W322)
2yvjA Crystal structure of the ferredoxin-ferredoxin reductase (bpha3-bpha4)complex (see paper)
41% identity, 82% coverage: 1:337/410 of query aligns to 2:331/402 of 2yvjA
- active site: L13 (≠ H12), R44 (= R43), P45 (= P44), Q291 (≠ E298)
- binding flavin-adenine dinucleotide: G10 (= G9), G12 (= G11), G35 (= G34), D36 (= D35), E37 (= E36), R44 (= R43), P45 (= P44), A78 (≠ V81), T105 (= T108), G106 (= G109), R126 (= R129), G268 (= G275), D269 (= D276), T286 (= T293), W287 (= W294), A290 (= A297), W316 (= W322)
- binding 1,4-dihydronicotinamide adenine dinucleotide: V147 (≠ I150), G148 (= G151), G149 (= G152), G150 (= G153), I152 (= I155), V170 (≠ L173), E171 (= E174), T172 (≠ A175), R179 (= R182), G230 (= G237), I231 (= I238), G232 (= G239), V233 (≠ M240), E285 (= E292)
1f3pA Ferredoxin reductase (bpha4)-nadh complex (see paper)
41% identity, 82% coverage: 1:337/410 of query aligns to 2:331/401 of 1f3pA
- active site: L13 (≠ H12), R44 (= R43), P45 (= P44), Q291 (≠ E298)
- binding flavin-adenine dinucleotide: A14 (= A13), V34 (≠ I33), D36 (= D35), E37 (= E36), R44 (= R43), P45 (= P44), A78 (≠ V81), T105 (= T108), G106 (= G109), R126 (= R129), G268 (= G275), D269 (= D276), E285 (= E292), T286 (= T293), W287 (= W294), A290 (= A297), W316 (= W322)
- binding nicotinamide-adenine-dinucleotide: V147 (≠ I150), G148 (= G151), G150 (= G153), V151 (≠ F154), I152 (= I155), E155 (= E158), E171 (= E174), T172 (≠ A175), R179 (= R182), G230 (= G237), I231 (= I238), G232 (= G239), V233 (≠ M240), E285 (= E292), W316 (= W322), S317 (= S323)
8pxkA Structure of nadh-dependent ferredoxin reductase, bpha4, solved at wavelength 5.76 a (see paper)
41% identity, 82% coverage: 1:337/410 of query aligns to 3:332/403 of 8pxkA
- binding flavin-adenine dinucleotide: G13 (= G11), A15 (= A13), D37 (= D35), E38 (= E36), R45 (= R43), P46 (= P44), K50 (= K48), A79 (≠ V81), T106 (= T108), G107 (= G109), R127 (= R129), I153 (= I155), G269 (= G275), D270 (= D276), E286 (= E292), T287 (= T293), W288 (= W294), A291 (= A297), W317 (= W322)
2gr2A Crystal structure of ferredoxin reductase, bpha4 (oxidized form)
41% identity, 82% coverage: 1:337/410 of query aligns to 1:330/401 of 2gr2A
- active site: L12 (≠ H12), R43 (= R43), P44 (= P44), Q290 (≠ E298)
- binding adenosine-5-diphosphoribose: R109 (= R113), V146 (≠ I150), G147 (= G151), G149 (= G153), V150 (≠ F154), I151 (= I155), E170 (= E174), T171 (≠ A175), R178 (= R182), G229 (= G237), I230 (= I238), G231 (= G239), E284 (= E292)
- binding flavin-adenine dinucleotide: G11 (= G11), A13 (= A13), D35 (= D35), E36 (= E36), R43 (= R43), P44 (= P44), K48 (= K48), A77 (≠ V81), T104 (= T108), G105 (= G109), R125 (= R129), G267 (= G275), D268 (= D276), T285 (= T293), W286 (= W294), A289 (= A297), W315 (= W322)
2gr0A Crystal structure of ferredoxin reductase, bpha4 (oxidized form, NAD+ complex) (see paper)
41% identity, 82% coverage: 1:337/410 of query aligns to 1:330/401 of 2gr0A
- active site: L12 (≠ H12), R43 (= R43), P44 (= P44), Q290 (≠ E298)
- binding adenosine-5'-diphosphate: V146 (≠ I150), G147 (= G151), G149 (= G153), I151 (= I155), E170 (= E174), T171 (≠ A175), R178 (= R182), G229 (= G237), I230 (= I238), G231 (= G239)
- binding flavin-adenine dinucleotide: G11 (= G11), A13 (= A13), D35 (= D35), E36 (= E36), R43 (= R43), P44 (= P44), K48 (= K48), T76 (≠ P80), A77 (≠ V81), T104 (= T108), G105 (= G109), R125 (= R129), I151 (= I155), G267 (= G275), D268 (= D276), E284 (= E292), T285 (= T293), W286 (= W294), A289 (= A297), W315 (= W322)
4h4uA Crystal structure of ferredoxin reductase, bpha4 t176r mutant (reduced form)
41% identity, 82% coverage: 1:337/410 of query aligns to 2:331/401 of 4h4uA
- active site: L13 (≠ H12), R44 (= R43), P45 (= P44), Q291 (≠ E298)
- binding flavin-adenine dinucleotide: G12 (= G11), A14 (= A13), D36 (= D35), R44 (= R43), P45 (= P44), A78 (≠ V81), T105 (= T108), G106 (= G109), L125 (= L128), R126 (= R129), I152 (= I155), E155 (= E158), G268 (= G275), D269 (= D276), E285 (= E292), T286 (= T293), W287 (= W294), A290 (= A297), W316 (= W322)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: V151 (≠ F154), I152 (= I155), E171 (= E174), R172 (≠ A175), Q173 (≠ G176), G230 (= G237), I231 (= I238), G232 (= G239), I284 (≠ Q291), E285 (= E292), Y315 (≠ F321)
4h4wA Crystal structure of ferredoxin reductase, bpha4 e175c/t176r/q177g mutant (reduced form)
41% identity, 82% coverage: 1:337/410 of query aligns to 1:330/399 of 4h4wA
- active site: L12 (≠ H12), R43 (= R43), P44 (= P44), Q290 (≠ E298)
- binding flavin-adenine dinucleotide: G11 (= G11), A13 (= A13), D35 (= D35), R43 (= R43), P44 (= P44), A77 (≠ V81), T104 (= T108), G105 (= G109), R125 (= R129), I151 (= I155), E154 (= E158), G267 (= G275), D268 (= D276), T285 (= T293), W286 (= W294), A289 (= A297), W315 (= W322)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G148 (= G152), I151 (= I155), R171 (≠ A175), S177 (≠ G181), R178 (= R182), G229 (= G237), I230 (= I238), G231 (= G239)
4emjA Complex between the reductase and ferredoxin components of toluene dioxygenase (see paper)
34% identity, 100% coverage: 1:409/410 of query aligns to 1:403/406 of 4emjA
- binding flavin-adenine dinucleotide: G11 (= G11), V12 (≠ H12), G13 (≠ A13), D35 (= D35), E36 (= E36), R43 (= R43), P44 (= P44), S47 (= S47), K48 (= K48), V80 (= V81), T107 (= T108), G108 (= G109), R128 (= R129), G274 (= G275), D275 (= D276), T291 (= T293), Y292 (≠ W294), S319 (≠ F321), W320 (= W322)
4emiA Toluene dioxygenase reductase in reduced state in complex with NAD+ (see paper)
34% identity, 98% coverage: 7:409/410 of query aligns to 6:402/402 of 4emiA
- binding flavin-adenine dinucleotide: G10 (= G11), V11 (≠ H12), G12 (≠ A13), D34 (= D35), E35 (= E36), R42 (= R43), P43 (= P44), K47 (= K48), E78 (≠ P80), V79 (= V81), T106 (= T108), G107 (= G109), G273 (= G275), D274 (= D276), T290 (= T293), Y291 (≠ W294), W319 (= W322)
- binding nicotinamide-adenine-dinucleotide: R111 (= R113), G149 (= G151), L152 (≠ F154), I153 (= I155), E156 (= E158), E172 (= E174), A173 (= A175), R180 (= R182), V236 (≠ I238), G237 (= G239), A238 (≠ M240), E289 (= E292), W319 (= W322), T320 (≠ S323)
6tukB Crystal structure of fdr9 (see paper)
35% identity, 88% coverage: 5:363/410 of query aligns to 4:353/393 of 6tukB
- binding flavin-adenine dinucleotide: V7 (= V8), G8 (= G9), G9 (≠ A10), G10 (= G11), A12 (= A13), A34 (≠ D35), E35 (= E36), R42 (= R43), P43 (= P44), K47 (= K48), A75 (≠ P80), A76 (≠ V81), T102 (= T108), G103 (= G109), V118 (≠ L128), R119 (= R129), G259 (= G275), D260 (= D276), H277 (≠ T293), W278 (= W294), F311 (= F321), W312 (= W322)
8d3iA Crystal structure of human apoptosis-inducing factor (aif) w196a mutant complexed with quinolin-4-amine
30% identity, 87% coverage: 2:357/410 of query aligns to 5:392/439 of 8d3iA
- binding quinolin-4-amine: F184 (= F154), L185 (≠ I155), E188 (= E158), W357 (= W322)
- binding flavin-adenine dinucleotide: G12 (= G9), A16 (= A13), E38 (≠ D35), D39 (≠ E36), R46 (= R43), P47 (= P44), K51 (= K48), K106 (≠ P80), V107 (= V81), T134 (= T108), F158 (≠ D132), G311 (= G275), D312 (= D276), E327 (= E292), H328 (≠ T293), H329 (≠ W294), W357 (= W322)
8c0zE Cryoem structure of a tungsten-containing aldehyde oxidoreductase from aromatoleum aromaticum (see paper)
34% identity, 76% coverage: 6:318/410 of query aligns to 4:318/424 of 8c0zE
8d3jA Crystal structure of human apoptosis-inducing factor (aif) complexed with 6-fluoro-2-methylquinolin-4-amine
30% identity, 87% coverage: 2:357/410 of query aligns to 5:389/436 of 8d3jA
- binding flavin-adenine dinucleotide: G12 (= G9), A16 (= A13), E38 (≠ D35), D39 (≠ E36), R46 (= R43), P47 (= P44), K51 (= K48), K103 (≠ P80), V104 (= V81), T131 (= T108), F155 (≠ D132), R156 (≠ E133), G308 (= G275), D309 (= D276), E324 (= E292), H325 (≠ T293), H326 (≠ W294), W354 (= W322)
- binding 6-fluoro-2-methylquinolin-4-amine: F181 (= F154), L182 (≠ I155), E185 (= E158), H325 (≠ T293), F353 (= F321), W354 (= W322), S355 (= S323)
8d3kA Crystal structure of human apoptosis-inducing factor (aif) complexed with 8-fluoro-2-methylquinolin-4-amine
31% identity, 87% coverage: 2:357/410 of query aligns to 5:390/437 of 8d3kA
- binding flavin-adenine dinucleotide: G12 (= G9), G13 (≠ A10), A16 (= A13), E38 (≠ D35), D39 (≠ E36), R46 (= R43), P47 (= P44), K51 (= K48), K104 (≠ P80), V105 (= V81), T132 (= T108), F156 (≠ D132), R157 (≠ E133), G309 (= G275), D310 (= D276), E325 (= E292), H326 (≠ T293), H327 (≠ W294), A330 (= A297), W355 (= W322)
- binding 8-fluoro-2-methylquinolin-4-amine: F182 (= F154), L183 (≠ I155), E186 (= E158), H326 (≠ T293), F354 (= F321), W355 (= W322), S356 (= S323)
8d3eA Crystal structure of human apoptosis-inducing factor (aif) w196a mutant complexed with 6-fluoroquinolin-4-amine
30% identity, 87% coverage: 2:358/410 of query aligns to 4:392/433 of 8d3eA
- binding flavin-adenine dinucleotide: G11 (= G9), G12 (≠ A10), A15 (= A13), E37 (≠ D35), D38 (≠ E36), R45 (= R43), P46 (= P44), K50 (= K48), K105 (≠ P80), V106 (= V81), T133 (= T108), F157 (≠ D132), R158 (≠ E133), G310 (= G275), D311 (= D276), E326 (= E292), H327 (≠ T293), H328 (≠ W294), A331 (= A297), W356 (= W322)
- binding 6-fluoroquinolin-4-amine: F183 (= F154), L184 (≠ I155), E187 (= E158), E326 (= E292), H327 (≠ T293), F355 (= F321)
8d3hA Crystal structure of human apoptosis-inducing factor (aif) w196a mutant complexed with 7-chloroquinolin-4-amine
30% identity, 87% coverage: 2:358/410 of query aligns to 3:391/432 of 8d3hA
- binding flavin-adenine dinucleotide: G10 (= G9), G11 (≠ A10), T13 (≠ H12), A14 (= A13), E36 (≠ D35), D37 (≠ E36), R44 (= R43), P45 (= P44), S48 (= S47), K49 (= K48), K104 (≠ P80), V105 (= V81), T132 (= T108), G133 (= G109), F156 (≠ D132), R157 (≠ E133), G309 (= G275), D310 (= D276), H326 (≠ T293), H327 (≠ W294), A330 (= A297), W355 (= W322)
- binding 7-chloroquinolin-4-amine: F182 (= F154), L183 (≠ I155), E186 (= E158), W355 (= W322)
Query Sequence
>AO356_30130 FitnessBrowser__pseudo5_N2C3_1:AO356_30130
MNAPLIIVGAGHAGGRAALTLREQGYTGRLILIGDELHLPYERPPLSKGLLQGMMNLDDC
SLWSDSRLTELSIEHLAGNPVKSLDPQHHRLQLTDGRWLPYSRLLLATGGRARRLSLVPE
PLANVLYLRTHDEALALRSALMPGTRLVIIGGGFIGLEVAATARTLGCQVTLLEAGPRLA
GRVLPEAVSQALLELHRQQGVDVRLNVALERVQGIERAEVVQLVDGQVLPCDWVVVGIGM
QPNIELAAAAGLEVGQGIRVDAQLRTSAPDIFAAGDVCEFRLHADALFQRQETWRNAETQ
GRHAALNLLGGELPFEGVPGFWSDQYDWGLQTVGVISPAPPSAVRTLASGGLLLFYLDTE
QRLQGACGWGQGNSVAKDIKLCERLIANLTPLSVDALADADVPLKHLLRP
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory