Comparing AZOBR_RS00420 FitnessBrowser__azobra:AZOBR_RS00420 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
6st0A Taurine abc transporter substrate binding protein taua from e. Coli in complex with n-(2-acetamido)-2-aminoethanesulfonic acid (see paper)
30% identity, 65% coverage: 29:233/316 of query aligns to 2:210/298 of 6st0A
6ssyA Taurine abc transporter substrate binding protein taua from e. Coli in complex with 2-aminoethylphosphonic acid (see paper)
30% identity, 65% coverage: 29:233/316 of query aligns to 2:210/298 of 6ssyA
>AZOBR_RS00420 FitnessBrowser__azobra:AZOBR_RS00420
MRKTSWMAGALAAAVAGLCAVSASAQTKVTVAMSGWTGFAPITLAKETGIFKKNGIEVEI
KKMPTSNRHQAMAAGEVQAITTTVDTHLLYASSGVDVTQVLVLDSSHGGDGIVVRDAVNS
LADLKGKQVAVQYGGVPQFWLAYVLKKNGLSIGEVQTVNLQPSDAANAFVAGQFDAAVTY
EPYLSKVREANGKIIVTSDQTPGVIIDTLAFQPDYIQKNPKVVKAFVDSWFEALDEIKKD
EKKAFEIMARDVNQTPEQFATSAKTVLWYDKAGNVEYLTKTMPTFIKEVQDVMLEAKLIR
KAPPSLDSMTDASFVK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory