Comparing AZOBR_RS00690 AZOBR_RS00690 ATP-binding protein to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1b0uA Atp-binding subunit of the histidine permease from salmonella typhimurium (see paper)
65% identity, 91% coverage: 17:261/268 of query aligns to 5:250/258 of 1b0uA
P02915 Histidine/lysine/arginine/ornithine transport ATP-binding protein HisP; EC 7.4.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
65% identity, 91% coverage: 17:261/268 of query aligns to 9:254/258 of P02915
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
54% identity, 93% coverage: 15:264/268 of query aligns to 2:240/240 of 4ymuJ
3c4jA Abc protein artp in complex with atp-gamma-s
55% identity, 92% coverage: 17:262/268 of query aligns to 6:240/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
55% identity, 92% coverage: 17:262/268 of query aligns to 6:240/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
55% identity, 92% coverage: 17:262/268 of query aligns to 6:240/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
55% identity, 92% coverage: 17:262/268 of query aligns to 6:240/242 of 2oljA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
55% identity, 93% coverage: 15:264/268 of query aligns to 3:240/241 of 4u00A
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
37% identity, 91% coverage: 21:264/268 of query aligns to 12:245/343 of P30750
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
37% identity, 91% coverage: 21:264/268 of query aligns to 13:246/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
37% identity, 91% coverage: 21:264/268 of query aligns to 13:246/344 of 3tuiC
Sites not aligning to the query:
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
37% identity, 91% coverage: 21:264/268 of query aligns to 13:246/344 of 6cvlD
Sites not aligning to the query:
2pclA Crystal structure of abc transporter with complex (aq_297) from aquifex aeolicus vf5
37% identity, 84% coverage: 13:238/268 of query aligns to 2:216/223 of 2pclA
7ahhC Opua inhibited inward-facing, sbd docked (see paper)
40% identity, 83% coverage: 39:260/268 of query aligns to 51:263/382 of 7ahhC
Sites not aligning to the query:
7aheC Opua inhibited inward facing (see paper)
40% identity, 83% coverage: 39:260/268 of query aligns to 51:263/382 of 7aheC
Sites not aligning to the query:
5lilA Structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) (see paper)
37% identity, 83% coverage: 17:238/268 of query aligns to 6:220/615 of 5lilA
5lj7A Structure of aggregatibacter actinomycetemcomitans macb bound to atp (p21) (see paper)
37% identity, 83% coverage: 17:238/268 of query aligns to 6:220/592 of 5lj7A
7ahdC Opua (e190q) occluded (see paper)
40% identity, 82% coverage: 39:257/268 of query aligns to 51:260/260 of 7ahdC
Sites not aligning to the query:
2d62A Crystal structure of multiple sugar binding transport atp- binding protein
36% identity, 90% coverage: 19:260/268 of query aligns to 11:243/375 of 2d62A
P75831 Macrolide export ATP-binding/permease protein MacB; EC 7.6.2.- from Escherichia coli (strain K12) (see paper)
39% identity, 81% coverage: 27:244/268 of query aligns to 21:226/648 of P75831
>AZOBR_RS00690 AZOBR_RS00690 ATP-binding protein
MHRHPPTNPNAPEAVLVENVHKRFGPLEVLKGVSLTAREGDVITLIGSSGSGKSTLLRCI
NMLEVPDEGRIVIGGEAIGLKKARGGQTVPADSRQVDRIRTRLGMVFQSFNLWTHMTILE
NVIEAPVHVLGVPKAEAVDRARKLLDKVGILAKAESYPVQLSGGQQQRAAIARALAMQPK
VMLFDEPTSALDPELVGEVLLVIRQLAEEGNTMILVTHEMGFAREVASEVVFLHQGRIEE
RGPPDRVLVNPESDRVRQFLSRHLSGGG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory