Comparing AZOBR_RS03635 FitnessBrowser__azobra:AZOBR_RS03635 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6g4fA Crystal structure of the omega transaminase from pseudomonas jessenii in complex with pmp (see paper)
59% identity, 94% coverage: 21:463/471 of query aligns to 1:443/451 of 6g4fA
6g4eA Crystal structure of the omega transaminase from pseudomonas jessenii in complex with plp and 6-aminohexanoate (6-aca) (see paper)
59% identity, 94% coverage: 21:463/471 of query aligns to 1:443/451 of 6g4eA
6g4dB Crystal structure of the omega transaminase from pseudomonas jessenii in complex with plp (see paper)
59% identity, 94% coverage: 21:463/471 of query aligns to 1:443/453 of 6g4dB
5ghgB Transaminase w58l with smba
59% identity, 94% coverage: 21:463/471 of query aligns to 2:425/433 of 5ghgB
Q94CE5 Gamma-aminobutyrate transaminase POP2, mitochondrial; AtGABA-T; Gamma-aminobutyric acid aminotransferase 1; Protein HEXENAL RESPONSE 1; Protein POLLEN-PISTIL INCOMPATIBILITY 2; AtPOP2; EC 2.6.1.96 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
51% identity, 92% coverage: 32:464/471 of query aligns to 56:490/504 of Q94CE5
D6R3B6 Vanillin aminotransferase; Putative aminotransferase; pAMT; EC 2.6.1.119 from Capsicum frutescens (Cayenne pepper) (Tabasco pepper) (see paper)
52% identity, 87% coverage: 46:454/471 of query aligns to 27:436/459 of D6R3B6
5kr6B Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
49% identity, 93% coverage: 27:464/471 of query aligns to 13:455/460 of 5kr6B
5kr5A Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
48% identity, 93% coverage: 27:463/471 of query aligns to 9:450/455 of 5kr5A
5kr3A Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
47% identity, 93% coverage: 27:463/471 of query aligns to 12:451/458 of 5kr3A
5kquC Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
46% identity, 93% coverage: 26:463/471 of query aligns to 10:452/459 of 5kquC
3gjuA Crystal structure of a putative aminotransferase (mll7127) from mesorhizobium loti maff303099 at 1.55 a resolution
44% identity, 94% coverage: 21:464/471 of query aligns to 7:455/458 of 3gjuA
4e3qA Pmp-bound form of aminotransferase crystal structure from vibrio fluvialis (see paper)
42% identity, 94% coverage: 21:463/471 of query aligns to 4:445/452 of 4e3qA
6gwiB The crystal structure of halomonas elongata amino-transferase (see paper)
46% identity, 93% coverage: 27:463/471 of query aligns to 10:443/450 of 6gwiB
4grxC Structure of an omega-aminotransferase from paracoccus denitrificans (see paper)
42% identity, 94% coverage: 21:463/471 of query aligns to 1:442/449 of 4grxC
7qx0B Transaminase structure of plurienzyme (tr2e2) in complex with plp (see paper)
45% identity, 93% coverage: 27:463/471 of query aligns to 9:436/443 of 7qx0B
7qx3A Structure of the transaminase tr2e2 with eos (see paper)
46% identity, 88% coverage: 48:463/471 of query aligns to 3:415/422 of 7qx3A
7ypmA Crystal structure of transaminase cc1012 complexed with plp and l- alanine (see paper)
46% identity, 91% coverage: 42:470/471 of query aligns to 26:452/454 of 7ypmA
3fcrA Crystal structure of putative aminotransferase (yp_614685.1) from silicibacter sp. Tm1040 at 1.80 a resolution
41% identity, 93% coverage: 27:466/471 of query aligns to 12:457/458 of 3fcrA
7ypnD Crystal structure of transaminase cc1012 mutant m9 complexed with plp (see paper)
45% identity, 91% coverage: 42:470/471 of query aligns to 26:452/455 of 7ypnD
6io1B Crystal structure of a novel thermostable (s)-enantioselective omega- transaminase from thermomicrobium roseum (see paper)
42% identity, 93% coverage: 25:463/471 of query aligns to 10:444/448 of 6io1B
>AZOBR_RS03635 FitnessBrowser__azobra:AZOBR_RS03635
MTEQGVAATESFEPDNHGAGNSAASRDKAYFLHPYTNLHAHETQGPLIIERGEGVRVFDD
SGKEYIEGLASLWCVSLGWGEERLVEAATRQMRKLPTYHVFGHKSHEPGIDLAERLIKLA
PVPMSKVFFANSGSEANDTAVKLVWYYNNALGRPEKKKILSRVKAYHGVTVATASLTGLV
NNHRDFDLPIARIQHTDCPHHYRFAEPGESEEDFATRLAESLEALILAEGPETIAAMFAE
PVMGAGGVIVPPATYFAKIQPILKKYDILLVADEVICGFGRTGNFWGSQTMGMQPDILTC
AKQLSSGYLPISAVMVSDAVYRACVEESKKIGTFGHGYTYSAHPVAAAVAIETLKIYEER
DLVGHVRAVAPLFQRRLKALADHPLVGEARGVGLIGALELVADKETKTPFDPVGRAGAVV
NGLSQENGLIIRAMGDSVAVCPPLVIGEEDINRMFDRLTTALDAAIPVLRG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory