Comparing AZOBR_RS08835 FitnessBrowser__azobra:AZOBR_RS08835 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
29% identity, 53% coverage: 91:252/307 of query aligns to 87:236/296 of P68183
>AZOBR_RS08835 FitnessBrowser__azobra:AZOBR_RS08835
MIDLLRRIGLWGRGVVVAIPYLWLLLFFLVPFLIVFGISLSEAMLAQPPYAPLIDWLVDE
DAGTTKLQILLNLSNYLRLGGDDLYILAYLNSVKIALVTTVCCLLLGYPMAYAIARAEPS
RRGPLMMLVILPFWTSFLIRIYAWIGILKANGVVDNLLQWTGLTTEPFELLYSDWAVYIG
MTYCYLPFMVLPLYATLEKLDPTLLEAAADLGCRPWKAFLTVTLPLSLPGIIAGSLLVFI
PSVGEFVTPELLGGPDTLMIGRVLWNEFFANRDWPVASAVAIALLLFLVVPIMVFQHVQG
RQTEAGR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory