Comparing AZOBR_RS13245 FitnessBrowser__azobra:AZOBR_RS13245 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
8crvA Crystal structure of the carbamate kinase from pseudomonas aeruginosa
69% identity, 97% coverage: 1:308/317 of query aligns to 3:304/312 of 8crvA
1e19A Structure of the carbamate kinase-like carbamoyl phosphate synthetase from the hyperthermophilic archaeon pyrococcus furiosus bound to adp (see paper)
44% identity, 96% coverage: 2:306/317 of query aligns to 3:311/313 of 1e19A
4jz8A Carbamate kinase from giardia lamblia bound to citric acid (see paper)
39% identity, 96% coverage: 3:306/317 of query aligns to 7:313/316 of 4jz8A
4jz7C Carbamate kinase from giardia lamblia bound to amp-pnp (see paper)
39% identity, 96% coverage: 3:306/317 of query aligns to 7:313/316 of 4jz7C
4olcA Carbamate kinase from giardia lamblia thiocarbamoylated by disulfiram on cys242 (see paper)
40% identity, 96% coverage: 3:306/317 of query aligns to 6:305/308 of 4olcA
2we5A Carbamate kinase from enterococcus faecalis bound to mgadp (see paper)
40% identity, 91% coverage: 2:288/317 of query aligns to 3:287/309 of 2we5A
2we4A Carbamate kinase from enterococcus faecalis bound to a sulfate ion and two water molecules, which mimic the substrate carbamyl phosphate (see paper)
40% identity, 91% coverage: 2:288/317 of query aligns to 3:287/309 of 2we4A
P0A2X8 Carbamate kinase 1; EC 2.7.2.2 from Enterococcus faecium (Streptococcus faecium) (see 2 papers)
40% identity, 91% coverage: 2:288/317 of query aligns to 4:288/310 of P0A2X8
Sites not aligning to the query:
3kzfB Structure of giardia carbamate kinase (see paper)
38% identity, 96% coverage: 3:306/317 of query aligns to 6:295/298 of 3kzfB
3kzfD Structure of giardia carbamate kinase (see paper)
39% identity, 96% coverage: 3:306/317 of query aligns to 6:290/293 of 3kzfD
4jz7A Carbamate kinase from giardia lamblia bound to amp-pnp (see paper)
36% identity, 96% coverage: 3:306/317 of query aligns to 7:282/285 of 4jz7A
4axsA Structure of carbamate kinase from mycoplasma penetrans (see paper)
31% identity, 96% coverage: 2:306/317 of query aligns to 1:289/291 of 4axsA
>AZOBR_RS13245 FitnessBrowser__azobra:AZOBR_RS13245
MRVVVALGGNALLKRGEPMTADVQRRNIRIAAEAMAPVAREHQLVISHGNGPQVGLLALQ
GAAYRPDEAYPLDVLGAETEGMIGYMIEQELGNLLPFEVPFATLLTMVEVDGDDPAFGDP
TKFVGPVYGAAEAQRIAAEKGWVFKADGASWRRVVPSPAPKRIFEIRPIRWLLDQGTIVI
CAGGGGIPTMYQPAMHQPGKERTLVGVEAVIDKDLCSELLARELGADLLIMATDAEAVFL
GWGTPDARAIHRASPDAMGRYSFPAGSMGPKVDAACRFATATGRTAAIGALADIPAIVRG
EKGTLIDNAFTTTSWHG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory