Comparing AZOBR_RS13290 AZOBR_RS13290 ABC transporter to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
34% identity, 97% coverage: 1:251/259 of query aligns to 2:253/253 of 1g9xB
1g6hA Crystal structure of the adp conformation of mj1267, an atp- binding cassette of an abc transporter (see paper)
34% identity, 97% coverage: 1:252/259 of query aligns to 2:254/254 of 1g6hA
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
36% identity, 97% coverage: 2:253/259 of query aligns to 1:237/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
36% identity, 97% coverage: 2:253/259 of query aligns to 1:237/238 of 6s8gA
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
36% identity, 97% coverage: 2:251/259 of query aligns to 1:235/235 of 6mhzA
6mbnA Lptb e163q in complex with atp (see paper)
35% identity, 97% coverage: 2:252/259 of query aligns to 2:237/241 of 6mbnA
6mjpB Lptb(e163q)fgc from vibrio cholerae (see paper)
33% identity, 97% coverage: 4:253/259 of query aligns to 3:237/240 of 6mjpB
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
33% identity, 97% coverage: 4:253/259 of query aligns to 3:237/240 of 6mjpA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
36% identity, 96% coverage: 2:250/259 of query aligns to 1:234/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
36% identity, 96% coverage: 2:250/259 of query aligns to 1:234/234 of 4p31A
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
35% identity, 96% coverage: 2:249/259 of query aligns to 1:233/233 of 6b8bA
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
36% identity, 88% coverage: 16:243/259 of query aligns to 18:232/343 of P30750
Sites not aligning to the query:
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
32% identity, 96% coverage: 4:251/259 of query aligns to 7:238/240 of 1ji0A
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
35% identity, 88% coverage: 16:243/259 of query aligns to 19:233/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
35% identity, 88% coverage: 16:243/259 of query aligns to 19:233/344 of 3tuiC
Sites not aligning to the query:
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
35% identity, 88% coverage: 16:243/259 of query aligns to 19:233/344 of 6cvlD
Sites not aligning to the query:
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
36% identity, 90% coverage: 12:243/259 of query aligns to 26:239/378 of P69874
Sites not aligning to the query:
7chaI Cryo-em structure of p.Aeruginosa mlafebd with amppnp (see paper)
33% identity, 92% coverage: 9:247/259 of query aligns to 9:237/262 of 7chaI
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
33% identity, 89% coverage: 6:236/259 of query aligns to 7:220/285 of 4yerA